RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 EFR3AQ14156 821 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 ZNF750Q32MQ0 723 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 FBXO47Q5MNV8 452 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 FAM102AQ5T9C2 384 aaPredicted RBP4.86□□□□□ -1.63
SNRPF-202ENST00000549580 AGAP9Q5VTM2 703 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 MRNIPQ6NTE8 343 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 TAF2Q6P1X5 1199 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 TMPRSS9Q7Z410 1059 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 MOGAT3Q86VF5 341 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 CCDC28AQ8IWP9 274 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 SUPT20HQ8NEM7 779 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 SPPL3Q8TCT6 385 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 USP13Q92995 863 aaPredicted RBP4.86□□□□□ -1.63
SNRPF-202ENST00000549580 MPP4Q96JB8 637 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 PPM1MQ96MI6 270 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 TRIB1Q96RU8 372 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 PNKPQ96T60 521 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 PRPF18Q99633 342 aaKnown RBP4.86□□□□□ -1.63
SNRPF-202ENST00000549580 SMOQ99835 787 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 CTTNBP2NLQ9P2B4 639 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 HSFX1Q9UBD0 423 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 SRP68Q9UHB9 627 aaKnown RBP4.86□□□□□ -1.63
SNRPF-202ENST00000549580 HERC5Q9UII4 1024 aaKnown RBP4.86□□□□□ -1.63
SNRPF-202ENST00000549580 CDYLQ9Y232 598 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 CDY1Q9Y6F8 540 aa4.86□□□□□ -1.63
SNRPF-202ENST00000549580 ARHGEF17Q96PE2 2063 aaPredicted RBP4.85□□□□□ -1.63
SNRPF-202ENST00000549580 A0A0B4J269 797 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 CCDC195A0A1B0GUA6 201 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 OR2W5A6NFC9 320 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 E7ENX8 843 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 EYA2O00167 538 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 NTSR2O95665 410 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 PYGLP06737 847 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 KCNA3P22001 575 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 CST5P28325 142 aaPredicted RBP4.85□□□□□ -1.63
SNRPF-202ENST00000549580 LRPAP1P30533 357 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 GCLCP48506 637 aaPredicted RBP4.85□□□□□ -1.63
SNRPF-202ENST00000549580 DGKEP52429 567 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 ZNF134P52741 427 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 TAP2Q03519 686 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 ZNF844Q08AG5 666 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 NSUN2Q08J23 767 aaKnown RBP eCLIP4.85□□□□□ -1.63
SNRPF-202ENST00000549580 FOXI1Q12951 378 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 MAPK7Q13164 816 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 SIM2Q14190 667 aaPredicted RBP4.85□□□□□ -1.63
SNRPF-202ENST00000549580 ZIK1Q3SY52 487 aaPredicted RBP4.85□□□□□ -1.63
SNRPF-202ENST00000549580 MGAT5BQ3V5L5 792 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 INTS11Q5TA45 600 aaKnown RBP4.85□□□□□ -1.63
SNRPF-202ENST00000549580 FAXCQ5TGI0 409 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 SULT6B1Q6IMI4 303 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 MZT2AQ6P582 158 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 KCTD20Q7Z5Y7 419 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 PCGF5Q86SE9 256 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 ZNF280BQ86YH2 543 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 GATAD2AQ86YP4 633 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 OR1N1Q8NGS0 311 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 SMCR8Q8TEV9 937 aaPredicted RBP4.85□□□□□ -1.63
SNRPF-202ENST00000549580 RSC1A1Q92681 617 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 MYEOVQ96EZ4 313 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 FAM227BQ96M60 508 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 MED15Q96RN5 788 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 EIF2AK1Q9BQI3 630 aaKnown RBP4.85□□□□□ -1.63
SNRPF-202ENST00000549580 FAM167BQ9BTA0 163 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 DDX23Q9BUQ8 820 aaKnown RBP4.85□□□□□ -1.63
SNRPF-202ENST00000549580 SLC46A2Q9BY10 475 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 TTYH3Q9C0H2 523 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 REXO4Q9GZR2 422 aaKnown RBP4.85□□□□□ -1.63
SNRPF-202ENST00000549580 TP63Q9H3D4 680 aaPredicted RBP4.85□□□□□ -1.63
SNRPF-202ENST00000549580 SYBUQ9NX95 663 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 TERF2IPQ9NYB0 399 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 EIF2B4Q9UI10 523 aaKnown RBP4.85□□□□□ -1.63
SNRPF-202ENST00000549580 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.85□□□□□ -1.63
SNRPF-202ENST00000549580 MTO1Q9Y2Z2 717 aaKnown RBP4.85□□□□□ -1.63
SNRPF-202ENST00000549580 RAD54BQ9Y620 910 aa4.85□□□□□ -1.63
SNRPF-202ENST00000549580 CCDC78A2IDD5 438 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 RRN3P2A6NIE6 340 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 PCDH17O14917 1159 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 SOAT2O75908 522 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 ITGA2BP08514 1039 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 PECAM1P16284 738 aaPredicted RBP4.84□□□□□ -1.63
SNRPF-202ENST00000549580 MST1P26927 711 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 APOBEC3AP31941 199 aaPredicted RBP4.84□□□□□ -1.63
SNRPF-202ENST00000549580 ADD2P35612 726 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 LOXL3P58215 753 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 LILRA4P59901 499 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 NHLH2Q02577 135 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 KCNAB1Q14722 419 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 TIGD6Q17RP2 521 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 LCE1EQ5T753 118 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 MANEALQ5VSG8 457 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 TSHZ3Q63HK5 1081 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 LCORLQ8N3X6 602 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 Q8NA96 180 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 FAM98AQ8NCA5 519 aaKnown RBP4.84□□□□□ -1.63
SNRPF-202ENST00000549580 NAXEQ8NCW5 288 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 NSUN7Q8NE18 718 aaKnown RBP4.84□□□□□ -1.63
SNRPF-202ENST00000549580 BPIFB1Q8TDL5 484 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 PHACTR3Q96KR7 559 aa4.84□□□□□ -1.63
SNRPF-202ENST00000549580 PTDSS2Q9BVG9 487 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms