RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 ACBD6Q9BR61 282 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 ABCB6Q9NP58 842 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 PANK4Q9NVE7 773 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 BCCIPQ9P287 314 aaKnown RBP eCLIP13.04□□□□□ -0.32
DDX54-206ENST00000549271 HECTD1Q9ULT8 2610 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 ADAM23O75077 832 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 NFATC1O95644 943 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 USP17L7P0C7H9 530 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 CSH1P0DML2 217 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 CSH2P0DML3 217 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 KIR2DL1P43626 348 aaPredicted RBP13.03□□□□□ -0.32
DDX54-206ENST00000549271 ME1P48163 572 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 GPR15P49685 360 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 TSPY1Q01534 308 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 RPL6Q02878 288 aaKnown RBP13.03□□□□□ -0.32
DDX54-206ENST00000549271 CYP4F3Q08477 520 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 MESP2Q0VG99 397 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 EOGTQ5NDL2 527 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 RESP18Q5W5W9 173 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 CNNM4Q6P4Q7 775 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 SLC36A4Q6YBV0 504 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 TMEM86AQ8N2M4 240 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 PDCL2Q8N4E4 241 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 DEFB119Q8N690 84 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 C1orf127Q8N9H9 656 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 IQUBQ8NA54 791 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 LSM14AQ8ND56 463 aaKnown RBP13.03□□□□□ -0.32
DDX54-206ENST00000549271 STKLD1Q8NE28 680 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 ZSWIM2Q8NEG5 633 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 CACTINQ8WUQ7 758 aaKnown RBP13.03□□□□□ -0.32
DDX54-206ENST00000549271 TRMT2BQ96GJ1 504 aaKnown RBP13.03□□□□□ -0.32
DDX54-206ENST00000549271 MYRFLQ96LU7 910 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 PKMYT1Q99640 499 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 TRIM9Q9C026 710 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 TNMDQ9H2S6 317 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 CUEDC2Q9H467 287 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 TMLHEQ9NVH6 421 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 GDAP2Q9NXN4 497 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 ABI2Q9NYB9 513 aaPredicted RBP13.03□□□□□ -0.32
DDX54-206ENST00000549271 GCNT4Q9P109 453 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 CFAP45Q9UL16 551 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 PCDHB13Q9Y5F0 798 aa13.03□□□□□ -0.32
DDX54-206ENST00000549271 PTPRQQ9UMZ3 2332 aa13.02□□□□□ -0.32
DDX54-206ENST00000549271 A0A0A0MRY4 1105 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 TRAV19A0A0A6YYK7 116 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 A0A1W2PQD8 194 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 POLR2DO15514 142 aaKnown RBP13.02□□□□□ -0.33
DDX54-206ENST00000549271 NOL4O94818 638 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 DKK1O94907 266 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 GCNT3O95395 438 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 CKMP06732 381 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 TIE1P35590 1138 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 WNT7BP56706 349 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 RPL10AP62906 217 aaKnown RBP13.02□□□□□ -0.33
DDX54-206ENST00000549271 CAMK2BQ13554 666 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 CFAP221Q4G0U5 840 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 ZNF605Q86T29 641 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 SLC41A1Q8IVJ1 513 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 ZNF843Q8N446 348 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 TTC16Q8NEE8 873 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 SH3RF2Q8TEC5 729 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 HPS3Q969F9 1004 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 C7orf25Q9BPX7 421 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 FAM213AQ9BRX8 229 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 TOR4AQ9NXH8 423 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 UXTQ9UBK9 157 aaPredicted RBP13.02□□□□□ -0.33
DDX54-206ENST00000549271 ITGA11Q9UKX5 1188 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 PCOLCE2Q9UKZ9 415 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 L1RE1Q9UN81 338 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 MAGED2Q9UNF1 606 aaPredicted RBP13.02□□□□□ -0.33
DDX54-206ENST00000549271 AGAP1Q9UPQ3 857 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 MGAQ8IWI9 3026 aa13.02□□□□□ -0.33
DDX54-206ENST00000549271 MUC22E2RYF6 1773 aaPredicted RBP13.02□□□□□ -0.33
DDX54-206ENST00000549271 TCRBV21S2A2A0A5A6 115 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 TRABD2BA6NFA1 517 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 GABRDO14764 452 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 KIAA0391O15091 583 aaKnown RBP13.01□□□□□ -0.33
DDX54-206ENST00000549271 HUS1O60921 280 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 PRPF40AO75400 957 aaKnown RBP13.01□□□□□ -0.33
DDX54-206ENST00000549271 PRPF6O94906 941 aaKnown RBP13.01□□□□□ -0.33
DDX54-206ENST00000549271 ITGB3P05106 788 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 POLR2BP30876 1174 aaKnown RBP13.01□□□□□ -0.33
DDX54-206ENST00000549271 HOXD13P35453 343 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 EIF2DP41214 584 aaKnown RBP13.01□□□□□ -0.33
DDX54-206ENST00000549271 TFAMQ00059 246 aaKnown RBP13.01□□□□□ -0.33
DDX54-206ENST00000549271 MYL7Q01449 175 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 INTS6LQ5JSJ4 861 aaKnown RBP13.01□□□□□ -0.33
DDX54-206ENST00000549271 EMC10Q5UCC4 262 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 DPH6Q7L8W6 267 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 LIMS2Q7Z4I7 341 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 CCDC65Q8IXS2 484 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 PGBD3Q8N328 593 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 TOP6BLQ8N6T0 577 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 FUBP3Q96I24 572 aaKnown RBP eCLIP13.01□□□□□ -0.33
DDX54-206ENST00000549271 PI4K2AQ9BTU6 479 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 LRRC27Q9C0I9 530 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 TRPC7Q9HCX4 862 aa13.01□□□□□ -0.33
DDX54-206ENST00000549271 DDX43Q9NXZ2 648 aaKnown RBP13.01□□□□□ -0.33
DDX54-206ENST00000549271 RBAKQ9NYW8 714 aaPredicted RBP13.01□□□□□ -0.33
DDX54-206ENST00000549271 ARHGAP26Q9UNA1 814 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms