RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 TMEM110Q86TL2 294 aa17.16■□□□□ 0.34
LIMS2-217ENST00000545738 PIDD1Q9HB75 910 aa17.16■□□□□ 0.34
LIMS2-217ENST00000545738 WDR6Q9NNW5 1121 aaKnown RBP17.16■□□□□ 0.34
LIMS2-217ENST00000545738 ST7Q9NRC1 585 aa17.16■□□□□ 0.34
LIMS2-217ENST00000545738 SEPT11Q9NVA2 429 aaKnown RBP17.16■□□□□ 0.34
LIMS2-217ENST00000545738 GMIPQ9P107 970 aa17.16■□□□□ 0.34
LIMS2-217ENST00000545738 NENFQ9UMX5 172 aa17.16■□□□□ 0.34
LIMS2-217ENST00000545738 MYL4P12829 197 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 CEBPBP17676 345 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 PTPN2P17706 415 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 FECHP22830 423 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 GABRR2P28476 465 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 CYP4F8P98187 520 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 CENPCQ03188 943 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 ELMSAN1Q6PJG2 1045 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 HFE2Q6ZVN8 426 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 SCD5Q86SK9 330 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 SCUBE3Q8IX30 993 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 TMEM35BQ8NCS4 154 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 STK32AQ8WU08 396 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 ING5Q8WYH8 240 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 PPP1R13BQ96KQ4 1090 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 HSFY1Q96LI6 401 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 CEP295NLQ96MC4 621 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 MIS12Q9H081 205 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 PDCL3Q9H2J4 239 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 ASAH2Q9NR71 780 aa17.15■□□□□ 0.34
LIMS2-217ENST00000545738 CHORDC1Q9UHD1 332 aaPredicted RBP17.15■□□□□ 0.34
LIMS2-217ENST00000545738 CLUHO75153 1309 aa17.14■□□□□ 0.33
LIMS2-217ENST00000545738 TMCO5BA8MYB1 307 aa17.14■□□□□ 0.33
LIMS2-217ENST00000545738 LSM8O95777 96 aaKnown RBP17.14■□□□□ 0.33
LIMS2-217ENST00000545738 TPM1P09493 284 aa17.14■□□□□ 0.33
LIMS2-217ENST00000545738 CCDC172P0C7W6 258 aa17.14■□□□□ 0.33
LIMS2-217ENST00000545738 YWHAQP27348 245 aa17.14■□□□□ 0.33
LIMS2-217ENST00000545738 KCNQ1P51787 676 aa17.14■□□□□ 0.33
LIMS2-217ENST00000545738 TAF5Q15542 800 aa17.14■□□□□ 0.33
LIMS2-217ENST00000545738 LEXMQ3ZCV2 418 aa17.14■□□□□ 0.33
LIMS2-217ENST00000545738 PM20D1Q6GTS8 502 aa17.14■□□□□ 0.33
LIMS2-217ENST00000545738 ITIH5Q86UX2 942 aa17.14■□□□□ 0.33
LIMS2-217ENST00000545738 ELMOD1Q8N336 334 aa17.14■□□□□ 0.33
LIMS2-217ENST00000545738 IMPACTQ9P2X3 320 aa17.14■□□□□ 0.33
LIMS2-217ENST00000545738 NCANO14594 1321 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 YJEFN3A6XGL0 299 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 E7ENQ6 273 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 ZNF263O14978 683 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 ZDHHC11BP0C7U3 371 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 TNFAIP3P21580 790 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 MMP8P22894 467 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 SLC8A3P57103 927 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 DAOAP59103 153 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 GFPT1Q06210 699 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-217ENST00000545738 MAPK8IP2Q13387 824 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-217ENST00000545738 SMAD4Q13485 552 aaKnown RBP17.13■□□□□ 0.33
LIMS2-217ENST00000545738 CBX2Q14781 532 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-217ENST00000545738 MTF1Q14872 753 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 CES5AQ6NT32 575 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 MMS22LQ6ZRQ5 1243 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 MON1BQ7L1V2 547 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 CCDC186Q7Z3E2 898 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 PHLDB2Q86SQ0 1253 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 FMNL3Q8IVF7 1028 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 ST13P5Q8NFI4 369 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-217ENST00000545738 KHSRPQ92945 711 aaKnown RBP eCLIP17.13■□□□□ 0.33
LIMS2-217ENST00000545738 FBXO32Q969P5 355 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 PDLIM2Q96JY6 352 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 ZSWIM3Q96MP5 696 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 PANX2Q96RD6 677 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 SLC22A12Q96S37 553 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 NHEJ1Q9H9Q4 299 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-217ENST00000545738 LRRC4Q9HBW1 653 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 SCML2Q9UQR0 700 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 C2orf78A6NCI8 922 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 ZNF840PA6NDX5 716 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 RTN3O95197 1032 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-217ENST00000545738 ZBED1O96006 694 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 IL9P15248 144 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 SP100P23497 879 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-217ENST00000545738 TEAD2Q15562 447 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 ATAT1Q5SQI0 421 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 OLFML1Q6UWY5 402 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 FAM183BPQ6ZVS7 135 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 PDZD4Q76G19 769 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-217ENST00000545738 C11orf70Q9BRQ4 267 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 AVENQ9NQS1 362 aaPredicted RBP17.13■□□□□ 0.33
LIMS2-217ENST00000545738 SPTLC3Q9NUV7 552 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 COG5Q9UP83 839 aa17.13■□□□□ 0.33
LIMS2-217ENST00000545738 BZW2Q9Y6E2 419 aaKnown RBP17.13■□□□□ 0.33
LIMS2-217ENST00000545738 A0A1W2PQH9 124 aa17.12■□□□□ 0.33
LIMS2-217ENST00000545738 SOWAHDA6NJG2 315 aa17.12■□□□□ 0.33
LIMS2-217ENST00000545738 GJB6O95452 261 aa17.12■□□□□ 0.33
LIMS2-217ENST00000545738 FYNP06241 537 aa17.12■□□□□ 0.33
LIMS2-217ENST00000545738 GABRB2P47870 512 aa17.12■□□□□ 0.33
LIMS2-217ENST00000545738 CDK17Q00537 523 aa17.12■□□□□ 0.33
LIMS2-217ENST00000545738 TAF12Q16514 161 aa17.12■□□□□ 0.33
LIMS2-217ENST00000545738 TXNDC8Q6A555 127 aa17.12■□□□□ 0.33
LIMS2-217ENST00000545738 TRIM72Q6ZMU5 477 aa17.12■□□□□ 0.33
LIMS2-217ENST00000545738 GET4Q7L5D6 327 aaPredicted RBP17.12■□□□□ 0.33
LIMS2-217ENST00000545738 XYLT1Q86Y38 959 aa17.12■□□□□ 0.33
LIMS2-217ENST00000545738 NPAS3Q8IXF0 933 aa17.12■□□□□ 0.33
LIMS2-217ENST00000545738 MYADMQ96S97 322 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms