RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 KCNK16Q96T55 309 aa8.91□□□□□ -0.98
ABCB1-210ENST00000543898 SPATA16Q9BXB7 569 aa8.91□□□□□ -0.98
ABCB1-210ENST00000543898 MRPL1Q9BYD6 325 aaKnown RBP8.91□□□□□ -0.98
ABCB1-210ENST00000543898 STRIP2Q9ULQ0 834 aa8.91□□□□□ -0.98
ABCB1-210ENST00000543898 PPM1HQ9ULR3 514 aa8.91□□□□□ -0.98
ABCB1-210ENST00000543898 TMA7Q9Y2S6 64 aaKnown RBP8.91□□□□□ -0.98
ABCB1-210ENST00000543898 COMMD3-BMI1R4GMX3 469 aa8.91□□□□□ -0.98
ABCB1-210ENST00000543898 SIPA1L3O60292 1781 aaPredicted RBP8.91□□□□□ -0.98
ABCB1-210ENST00000543898 NFIBO00712 420 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 DCXO43602 365 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 PEX1O43933 1283 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 COQ9O75208 318 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 SEC24DO94855 1032 aaPredicted RBP8.9□□□□□ -0.98
ABCB1-210ENST00000543898 MX2P20592 715 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 PMLP29590 882 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 MAGEA8P43361 318 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 KRT76Q01546 638 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 TKFCQ3LXA3 575 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 FASTKD1Q53R41 847 aaKnown RBP8.9□□□□□ -0.98
ABCB1-210ENST00000543898 APOBEC3HQ6NTF7 200 aaKnown RBP8.9□□□□□ -0.98
ABCB1-210ENST00000543898 HHIPL2Q6UWX4 724 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 ANKS1BQ7Z6G8 1248 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 FAM160B2Q86V87 743 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 TTC30AQ86WT1 665 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 LRRC43Q8N309 656 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 DNAAF3Q8N9W5 541 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 NRG4Q8WWG1 115 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 ZBTB45Q96K62 511 aaPredicted RBP8.9□□□□□ -0.98
ABCB1-210ENST00000543898 CCT7Q99832 543 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.9□□□□□ -0.98
ABCB1-210ENST00000543898 ETNK2Q9NVF9 386 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 ATXN10Q9UBB4 475 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 GINS2Q9Y248 185 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 MARF1Q9Y4F3 1742 aaKnown RBP8.9□□□□□ -0.98
ABCB1-210ENST00000543898 INO80B-WBP1J3KQ70 363 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 LYPLA1O75608 230 aaPredicted RBP8.9□□□□□ -0.98
ABCB1-210ENST00000543898 MUTP22033 750 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 ALDH1B1P30837 517 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 GARSP41250 739 aaKnown RBP8.9□□□□□ -0.98
ABCB1-210ENST00000543898 CDK7P50613 346 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 YWHAEP62258 255 aaKnown RBP8.9□□□□□ -0.98
ABCB1-210ENST00000543898 PEX6Q13608 980 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 C11orf91Q3C1V1 193 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 SLFN12LQ6IEE8 588 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 NPNTQ6UXI9 565 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 TAAR1Q96RJ0 339 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 INO80BQ9C086 356 aaPredicted RBP8.9□□□□□ -0.98
ABCB1-210ENST00000543898 ASNSD1Q9NWL6 643 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 GPATCH2LQ9NWQ4 482 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 SLC7A8Q9UHI5 535 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 MYH11P35749 1972 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 IGLV3-22A0A075B6J6 115 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 CAPN8A6NHC0 703 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 M0QYV0 167 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 MAGEB2O15479 319 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 TBC1D12O60347 775 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 TM7SF2O76062 418 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 PSAPP07602 524 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 RARBP10826 455 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 NLRP11P59045 1033 aaKnown RBP8.9□□□□□ -0.98
ABCB1-210ENST00000543898 PRKG1Q13976 671 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 DPYSL3Q14195 570 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 FLOT2Q14254 428 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 NFIL3Q16649 462 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 EFHC2Q5JST6 749 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 RNASEH2BQ5TBB1 312 aaKnown RBP8.9□□□□□ -0.98
ABCB1-210ENST00000543898 DCLK2Q8N568 766 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 GMCL1Q96IK5 515 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 PPP1R16BQ96T49 567 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 UBE2OQ9C0C9 1292 aaKnown RBP8.9□□□□□ -0.98
ABCB1-210ENST00000543898 CYP26B1Q9NR63 512 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 INPP5FQ9Y2H2 1132 aa8.9□□□□□ -0.98
ABCB1-210ENST00000543898 MED7O43513 233 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 EXTL3O43909 919 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 SRGAP2BP0DMP2 458 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 PDGFRAP16234 1089 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 ITGB5P18084 799 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 GDF10P55107 478 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 NOMO3P69849 1222 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 GTF2BQ00403 316 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 C1QBPQ07021 282 aaKnown RBP8.9□□□□□ -0.99
ABCB1-210ENST00000543898 WDR72Q3MJ13 1102 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 RALGPS1Q5JS13 557 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 TXNRD3NBQ6F5E7 133 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 CDR2LQ86X02 465 aaPredicted RBP8.9□□□□□ -0.99
ABCB1-210ENST00000543898 BANPQ8N9N5 519 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 DENND1AQ8TEH3 1009 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 CPT1BQ92523 772 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 USP13Q92995 863 aaPredicted RBP8.9□□□□□ -0.99
ABCB1-210ENST00000543898 MKL1Q969V6 931 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 SYT11Q9BT88 431 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 YIPF2Q9BWQ6 316 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 PREBQ9HCU5 417 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 ARHGAP26Q9UNA1 814 aa8.9□□□□□ -0.99
ABCB1-210ENST00000543898 SPATA31A1Q5TZJ5 1347 aa8.89□□□□□ -0.99
ABCB1-210ENST00000543898 hCG_1818297A0A087WSY0 165 aa8.89□□□□□ -0.99
ABCB1-210ENST00000543898 A0A0B4J269 797 aa8.89□□□□□ -0.99
ABCB1-210ENST00000543898 CCDC78A2IDD5 438 aa8.89□□□□□ -0.99
ABCB1-210ENST00000543898 POLRMTO00411 1230 aaKnown RBP8.89□□□□□ -0.99
ABCB1-210ENST00000543898 MAP3K13O43283 966 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms