RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 SPTLC1O15269 473 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 PRPSAP2O60256 369 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 PDGFRBP09619 1106 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 KRT15P19012 456 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 HNRNPH1P31943 449 aaKnown RBP14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 ROR1Q01973 937 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 ACAP1Q15027 740 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 DARS2Q6PI48 645 aaKnown RBP14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 CEP128Q6ZU80 1094 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 PLEKHH3Q7Z736 793 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 ANKRD23Q86SG2 305 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 SESTD1Q86VW0 696 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 AGGF1Q8N302 714 aaeCLIP14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 CCDC33Q8N5R6 958 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 PQLC3Q8N755 202 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 OR6B3Q8NGW1 331 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 SNRNP25Q9BV90 132 aaKnown RBP14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 MAK16Q9BXY0 300 aaKnown RBP14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 NSRP1Q9H0G5 558 aaKnown RBP14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 NKIRAS1Q9NYS0 192 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 FLRT1Q9NZU1 646 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 SLC45A1Q9Y2W3 748 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 FAM47DPA6NHR8 397 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 TAC1P20366 129 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 LMO2P25791 158 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 ADORA2BP29275 332 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 ARL4CP56559 192 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 KRT81Q14533 505 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 FAM133BQ5BKY9 247 aaKnown RBP14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 FAXCQ5TGI0 409 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 C9orf57Q5W0N0 161 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 FAM47EQ6ZV65 393 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 TDRPQ86YL5 185 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 RIBC1Q8N443 379 aaPredicted RBP14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 PLD5Q8N7P1 536 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 C7orf31Q8N865 590 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 ANKS4BQ8N8V4 417 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 FBF1Q8TES7 1133 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 PYROXD1Q8WU10 500 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 SLC35F5Q8WV83 523 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 DNAJB3Q8WWF6 145 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 RNF157Q96PX1 679 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 SLC4A5Q9BY07 1137 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 GCOM2Q9BZD3 368 aaPredicted RBP14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 KDM4CQ9H3R0 1056 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 SLC40A1Q9NP59 571 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 SLC5A4Q9NY91 659 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 CPA4Q9UI42 421 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 ZMYND8Q9ULU4 1186 aaPredicted RBP14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 CHMP2BQ9UQN3 213 aa14.29□□□□□ -0.12
SLC3A2-220ENST00000542922 ZNF638Q14966 1978 aaKnown RBP14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 H7C0C1 242 aa14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 HGSO14964 777 aaPredicted RBP14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 AVILO75366 819 aa14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 CYP2C9P11712 490 aa14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 RPA3P35244 121 aaPredicted RBP14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 ATP5OP48047 213 aa14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 YARSP54577 528 aaKnown RBP14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 HDAC4P56524 1084 aa14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 SOX4Q06945 474 aaPredicted RBP14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 EFHC2Q5JST6 749 aa14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 OLFML2BQ68BL8 750 aa14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 TRPM8Q7Z2W7 1104 aa14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 NT5DC4Q86YG4 428 aa14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 PCDH19Q8TAB3 1148 aa14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 KBTBD7Q8WVZ9 684 aa14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 P3H4Q92791 437 aa14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 THOC1Q96FV9 657 aaKnown RBP14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 FRMD8P1Q9BZ68 369 aaPredicted RBP14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 C12orf65Q9H3J6 166 aaKnown RBP14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 ACTR5Q9H9F9 607 aaPredicted RBP14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 PCDH18Q9HCL0 1135 aa14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 USP15Q9Y4E8 981 aaPredicted RBP14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 HEY1Q9Y5J3 304 aa14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 ACTL7BQ9Y614 415 aa14.28□□□□□ -0.12
SLC3A2-220ENST00000542922 A8MXQ7 604 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 E7ESA3 106 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 ASMTLO95671 621 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 F2P00734 622 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 DARSP14868 501 aaKnown RBP14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 IGFBP6P24592 240 aaPredicted RBP14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 SLC6A3Q01959 620 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 SLC1A5Q15758 541 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 SMYD5Q6GMV2 418 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 ALKAL1Q6UXT8 129 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 ARHGEF18Q6ZSZ5 1173 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 C3orf62Q6ZUJ4 267 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 PCGF5Q86SE9 256 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 DENND1AQ8TEH3 1009 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 RMDN2Q96LZ7 410 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 MAGEB18Q96M61 343 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 PLEKHA5Q9HAU0 1116 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 USP29Q9HBJ7 922 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 KIAA1257Q9ULG3 409 aa14.27□□□□□ -0.12
SLC3A2-220ENST00000542922 DPYSL4O14531 572 aa14.27□□□□□ -0.13
SLC3A2-220ENST00000542922 TREHO43280 583 aa14.27□□□□□ -0.13
SLC3A2-220ENST00000542922 RASSF9O75901 435 aa14.27□□□□□ -0.13
SLC3A2-220ENST00000542922 UBOX5O94941 541 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms