RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 IRGCQ6NXR0 463 aa14.56□□□□□ -0.08
TRPM1-203ENST00000542188 ERO1BQ86YB8 467 aa14.56□□□□□ -0.08
TRPM1-203ENST00000542188 ZNF614Q8N883 585 aa14.56□□□□□ -0.08
TRPM1-203ENST00000542188 ZNF671Q8TAW3 534 aa14.56□□□□□ -0.08
TRPM1-203ENST00000542188 DCUN1D5Q9BTE7 237 aa14.56□□□□□ -0.08
TRPM1-203ENST00000542188 BCLAF3A2AJT9 711 aaKnown RBP14.56□□□□□ -0.08
TRPM1-203ENST00000542188 NDUFB5O43674 189 aa14.56□□□□□ -0.08
TRPM1-203ENST00000542188 IL18RAPO95256 599 aa14.56□□□□□ -0.08
TRPM1-203ENST00000542188 ACADLP28330 430 aa14.56□□□□□ -0.08
TRPM1-203ENST00000542188 STIP1P31948 543 aaKnown RBP14.56□□□□□ -0.08
TRPM1-203ENST00000542188 FMO5P49326 533 aa14.56□□□□□ -0.08
TRPM1-203ENST00000542188 SNRPFP62306 86 aaKnown RBP14.56□□□□□ -0.08
TRPM1-203ENST00000542188 ATP2C1P98194 919 aaPredicted RBP14.56□□□□□ -0.08
TRPM1-203ENST00000542188 LRRC6Q86X45 466 aa14.56□□□□□ -0.08
TRPM1-203ENST00000542188 TCAIMQ8N3R3 496 aa14.56□□□□□ -0.08
TRPM1-203ENST00000542188 MARCH10Q8NA82 808 aaPredicted RBP14.56□□□□□ -0.08
TRPM1-203ENST00000542188 KYQ8NBH2 561 aa14.56□□□□□ -0.08
TRPM1-203ENST00000542188 FNIP1Q8TF40 1166 aa14.56□□□□□ -0.08
TRPM1-203ENST00000542188 MMADHCQ9H3L0 296 aaPredicted RBP14.56□□□□□ -0.08
TRPM1-203ENST00000542188 CHKBQ9Y259 395 aa14.56□□□□□ -0.08
TRPM1-203ENST00000542188 PDS5AQ29RF7 1337 aaKnown RBP14.55□□□□□ -0.08
TRPM1-203ENST00000542188 AQP5P55064 265 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 ABATP80404 500 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 MFSD4BQ5TF39 518 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 ESRP1Q6NXG1 681 aaKnown RBP14.55□□□□□ -0.08
TRPM1-203ENST00000542188 PROSER1Q86XN7 944 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 PABPC3Q9H361 631 aaKnown RBP14.55□□□□□ -0.08
TRPM1-203ENST00000542188 RAVER2Q9HCJ3 691 aaKnown RBP14.55□□□□□ -0.08
TRPM1-203ENST00000542188 AGAP1Q9UPQ3 857 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 FCER1AP12319 257 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 NPR3P17342 541 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 AVPR1AP37288 418 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 SRP54P61011 504 aaKnown RBP14.55□□□□□ -0.08
TRPM1-203ENST00000542188 RUNDC3AQ59EK9 446 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 FAM71DQ8N9W8 422 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 SPATA33Q96N06 139 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 KCTD10Q9H3F6 313 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 PIH1D3Q9NQM4 214 aaKnown RBP14.55□□□□□ -0.08
TRPM1-203ENST00000542188 AAR2Q9Y312 384 aaKnown RBP14.55□□□□□ -0.08
TRPM1-203ENST00000542188 MROH7Q68CQ1 1323 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 SSNA1O43805 119 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 LDLRP01130 860 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 CD4P01730 458 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 CCDC166P0CW27 439 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 RARBP10826 455 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 IL6STP40189 918 aaPredicted RBP14.55□□□□□ -0.08
TRPM1-203ENST00000542188 RGS7P49802 495 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 WDR72Q3MJ13 1102 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 DHFR2Q86XF0 187 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 ELOA2Q8IYF1 753 aaPredicted RBP14.55□□□□□ -0.08
TRPM1-203ENST00000542188 LRRC17Q8N6Y2 441 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 NSMCE2Q96MF7 247 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 SH3BP1Q9Y3L3 701 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 CST8O60676 142 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 GRK3P35626 688 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 RFX3P48380 749 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 TMEM132DQ14C87 1099 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 TCEAL5Q5H9L2 206 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 SNRNP48Q6IEG0 339 aaKnown RBP14.55□□□□□ -0.08
TRPM1-203ENST00000542188 SYN2Q92777 582 aaPredicted RBP14.55□□□□□ -0.08
TRPM1-203ENST00000542188 RACGAP1Q9H0H5 632 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 EPB41L4BQ9H329 900 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 DBNDD1Q9H9R9 158 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.55□□□□□ -0.08
TRPM1-203ENST00000542188 WHRNQ9P202 907 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 PHF11Q9UIL8 331 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 TEX14Q8IWB6 1497 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 LMTK3Q96Q04 1460 aa14.55□□□□□ -0.08
TRPM1-203ENST00000542188 BMP10O95393 424 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 RHAGQ02094 409 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 ULK2Q8IYT8 1036 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 FRMD6Q96NE9 622 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 NUAK2Q9H093 628 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 NEK6Q9HC98 313 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 UCHL3P15374 230 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 SFSWAPQ12872 951 aaKnown RBP14.54□□□□□ -0.08
TRPM1-203ENST00000542188 ITGADQ13349 1161 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 XRCC4Q13426 336 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 TTC27Q6P3X3 843 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 TMPRSS6Q8IU80 811 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 WDR41Q9HAD4 459 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 ADPRHL2Q9NX46 363 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 KCNQ3O43525 872 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 MGRN1O60291 552 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 KATNA1O75449 491 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 TKTP29401 623 aaKnown RBP14.54□□□□□ -0.08
TRPM1-203ENST00000542188 PDIA5Q14554 519 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 MTDHQ86UE4 582 aaKnown RBP14.54□□□□□ -0.08
TRPM1-203ENST00000542188 OXER1Q8TDS5 423 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 TRPC4APQ8TEL6 797 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 SGF29Q96ES7 293 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 TMEM47Q9BQJ4 181 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 COA1Q9GZY4 146 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 ENTPD7Q9NQZ7 604 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 TMEM260Q9NX78 707 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 NEDD4P46934 1319 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 VCLP18206 1134 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 C5orf22Q49AR2 442 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 PGBD2Q6P3X8 592 aa14.54□□□□□ -0.08
TRPM1-203ENST00000542188 NECAB2Q7Z6G3 386 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms