RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 CYTH4Q9UIA0 394 aa15.2■□□□□ 0.02
CDCA3-207ENST00000538862 ZBTB42B2RXF5 422 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 PGK1P00558 417 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 GBP2P32456 591 aaPredicted RBP15.19■□□□□ 0.02
CDCA3-207ENST00000538862 DYNLT1P63172 113 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 SLC1A5Q15758 541 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 ATF7IP2Q5U623 682 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 XYLT1Q86Y38 959 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 KIAA0319LQ8IZA0 1049 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 ALKBH8Q96BT7 664 aaKnown RBP15.19■□□□□ 0.02
CDCA3-207ENST00000538862 LRRC37BQ96QE4 947 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 RAB3IPQ96QF0 476 aaPredicted RBP15.19■□□□□ 0.02
CDCA3-207ENST00000538862 HTATIP2Q9BUP3 242 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 KATNBL1Q9H079 304 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 SAE1Q9UBE0 346 aaPredicted RBP15.19■□□□□ 0.02
CDCA3-207ENST00000538862 GRID1Q9ULK0 1009 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 POLIQ9UNA4 740 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 A0A1W2PPM1 405 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 APOC4-APOC2K7ER74 178 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 KIF1CO43896 1103 aaKnown RBP15.19■□□□□ 0.02
CDCA3-207ENST00000538862 APOC2P02655 101 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 RARBP10826 455 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 AKR1A1P14550 325 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 GABRB2P47870 512 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 RAD23BP54727 409 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 GDF10P55107 478 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 SMTNL2Q2TAL5 461 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 FNBP1LQ5T0N5 605 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 CAPN12Q6ZSI9 719 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 C3orf62Q6ZUJ4 267 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 ANKMY2Q8IV38 441 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 FBXO16Q8IX29 292 aaPredicted RBP15.19■□□□□ 0.02
CDCA3-207ENST00000538862 KIF2BQ8N4N8 673 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 AGAP11Q8TF27 550 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 TBC1D31Q96DN5 1066 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 MPHOSPH6Q99547 160 aaKnown RBP15.19■□□□□ 0.02
CDCA3-207ENST00000538862 GPR20Q99678 358 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 SENP6Q9GZR1 1112 aaPredicted RBP15.19■□□□□ 0.02
CDCA3-207ENST00000538862 MYLK2Q9H1R3 596 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 RPF1Q9H9Y2 349 aaKnown RBP15.19■□□□□ 0.02
CDCA3-207ENST00000538862 XPNPEP3Q9NQH7 507 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 NXF1Q9UBU9 619 aaKnown RBP15.19■□□□□ 0.02
CDCA3-207ENST00000538862 TNFSF13BQ9Y275 285 aa15.19■□□□□ 0.02
CDCA3-207ENST00000538862 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.18■□□□□ 0.02
CDCA3-207ENST00000538862 GOLGA8MH3BSY2 632 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 TM9SF1O15321 606 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 COL6A1P12109 1028 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 ATP2A2P16615 1042 aaKnown RBP15.18■□□□□ 0.02
CDCA3-207ENST00000538862 KRT4P19013 534 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 SSTR1P30872 391 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 LY6KQ17RY6 165 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 PARP6Q2NL67 630 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 KCNT1Q5JUK3 1230 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 PRPF38BQ5VTL8 546 aaKnown RBP15.18■□□□□ 0.02
CDCA3-207ENST00000538862 ANKRD22Q5VYY1 191 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 LVRNQ6Q4G3 990 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 RHPN2Q8IUC4 686 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 PDIK1LQ8N165 341 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 LRRC71Q8N4P6 559 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 KCTD6Q8NC69 237 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 ZNF398Q8TD17 642 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 ZNF75CPQ92670 426 aaPredicted RBP15.18■□□□□ 0.02
CDCA3-207ENST00000538862 INPP5DQ92835 1189 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 MCRS1Q96EZ8 462 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 CPXM1Q96SM3 734 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 ABHD16BQ9H3Z7 469 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 SYNCQ9H7C4 482 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 RSAD1Q9HA92 442 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 SLCO1B3Q9NPD5 702 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 PDGFCQ9NRA1 345 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 METTL5Q9NRN9 209 aaKnown RBP15.18■□□□□ 0.02
CDCA3-207ENST00000538862 CHKBQ9Y259 395 aa15.18■□□□□ 0.02
CDCA3-207ENST00000538862 RANBP2P49792 3224 aaKnown RBP15.18■□□□□ 0.02
CDCA3-207ENST00000538862 ASB14A6NK59 587 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 MCF2LO15068 1137 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 BANF1O75531 89 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 WFS1O76024 890 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 RNF8O76064 485 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 TRUB2O95900 331 aaKnown RBP15.17■□□□□ 0.02
CDCA3-207ENST00000538862 ERBB2P04626 1255 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 STIP1P31948 543 aaKnown RBP15.17■□□□□ 0.02
CDCA3-207ENST00000538862 SLC26A2P50443 739 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 ATN1P54259 1190 aaPredicted RBP15.17■□□□□ 0.02
CDCA3-207ENST00000538862 ATP11AP98196 1134 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 PTPN11Q06124 597 aaPredicted RBP15.17■□□□□ 0.02
CDCA3-207ENST00000538862 CBLBQ13191 982 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 MSS51Q4VC12 460 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 CELF3Q5SZQ8 465 aaKnown RBP15.17■□□□□ 0.02
CDCA3-207ENST00000538862 TLDC1Q6P9B6 456 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 FAM43BQ6ZT52 329 aaPredicted RBP15.17■□□□□ 0.02
CDCA3-207ENST00000538862 VSIG1Q86XK7 387 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 RFX6Q8HWS3 928 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 PALM2Q8IXS6 379 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 FBXO36Q8NEA4 188 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 MZB1Q8WU39 189 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 PAFAH2Q99487 392 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 LRMDAQ9H2I8 198 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 ETNK1Q9HBU6 452 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 CYLDQ9NQC7 956 aa15.17■□□□□ 0.02
CDCA3-207ENST00000538862 ASNSD1Q9NWL6 643 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms