RNA–Protein interactions for RNA: ENST00000533787.1

CCDC84-207, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 1,140 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-207ENST00000533787 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.68□□□□□ -0.38
CCDC84-207ENST00000533787 AP5Z1O43299 807 aa12.68□□□□□ -0.38
CCDC84-207ENST00000533787 TNNC2P02585 160 aa12.68□□□□□ -0.38
CCDC84-207ENST00000533787 MBL2P11226 248 aaPredicted RBP12.68□□□□□ -0.38
CCDC84-207ENST00000533787 ATXN3P54252 364 aaPredicted RBP12.68□□□□□ -0.38
CCDC84-207ENST00000533787 CACNA2D1P54289 1103 aa12.68□□□□□ -0.38
CCDC84-207ENST00000533787 DUOXA1Q1HG43 343 aa12.68□□□□□ -0.38
CCDC84-207ENST00000533787 MDH1BQ5I0G3 518 aa12.68□□□□□ -0.38
CCDC84-207ENST00000533787 TDRD10Q5VZ19 366 aaKnown RBP12.68□□□□□ -0.38
CCDC84-207ENST00000533787 BRAPQ7Z569 592 aa12.68□□□□□ -0.38
CCDC84-207ENST00000533787 DDX42Q86XP3 938 aaKnown RBP eCLIP12.68□□□□□ -0.38
CCDC84-207ENST00000533787 GPD1LQ8N335 351 aa12.68□□□□□ -0.38
CCDC84-207ENST00000533787 HDDC3Q8N4P3 179 aa12.68□□□□□ -0.38
CCDC84-207ENST00000533787 CEP76Q8TAP6 659 aa12.68□□□□□ -0.38
CCDC84-207ENST00000533787 C8orf48Q96LL4 319 aa12.68□□□□□ -0.38
CCDC84-207ENST00000533787 MMS19Q96T76 1030 aa12.68□□□□□ -0.38
CCDC84-207ENST00000533787 TBC1D14Q9P2M4 693 aa12.68□□□□□ -0.38
CCDC84-207ENST00000533787 CCDC39Q9UFE4 941 aa12.68□□□□□ -0.38
CCDC84-207ENST00000533787 NME7Q9Y5B8 376 aa12.68□□□□□ -0.38
CCDC84-207ENST00000533787 PKD1L2Q7Z442 2459 aa12.68□□□□□ -0.38
CCDC84-207ENST00000533787 LOC400499M0QZD8 3231 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 E2F8A0AVK6 867 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 H0Y626 953 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 OPHN1O60890 802 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 TRIM16O95361 564 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 SERPINF2P08697 491 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 IDEP14735 1019 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 FAM193AP78312 1265 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 RPL6Q02878 288 aaKnown RBP12.67□□□□□ -0.38
CCDC84-207ENST00000533787 GAD2Q05329 585 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 GFPT1Q06210 699 aaPredicted RBP12.67□□□□□ -0.38
CCDC84-207ENST00000533787 IFRD2Q12894 506 aaPredicted RBP12.67□□□□□ -0.38
CCDC84-207ENST00000533787 ALCAMQ13740 583 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 DUOXA2Q1HG44 320 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 LY6G5CQ5SRR4 150 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 LARP1BQ659C4 914 aaKnown RBP12.67□□□□□ -0.38
CCDC84-207ENST00000533787 SLC36A4Q6YBV0 504 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 SV2BQ7L1I2 683 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 HS2ST1Q7LGA3 356 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 ETFBKMTQ8IXQ9 262 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 MINDY1Q8N5J2 469 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 DEFB119Q8N690 84 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 SLITRK1Q96PX8 696 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 MRPL45Q9BRJ2 306 aaKnown RBP12.67□□□□□ -0.38
CCDC84-207ENST00000533787 CAPN10Q9HC96 672 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 TMEM30AQ9NV96 361 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 SMC3Q9UQE7 1217 aa12.67□□□□□ -0.38
CCDC84-207ENST00000533787 NBEAQ8NFP9 2946 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 FRMD3A2A2Y4 597 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 FAM221BA6H8Z2 402 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 TBC1D3BA6NDS4 549 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 ZNF233A6NK53 670 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 TAF4O00268 1085 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 KIAA0391O15091 583 aaKnown RBP12.66□□□□□ -0.38
CCDC84-207ENST00000533787 COCHO43405 550 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 TULP3O75386 442 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 PRPF6O94906 941 aaKnown RBP12.66□□□□□ -0.38
CCDC84-207ENST00000533787 CD2BP2O95400 341 aaKnown RBP12.66□□□□□ -0.38
CCDC84-207ENST00000533787 GABRG2P18507 467 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 RDXP35241 583 aaKnown RBP12.66□□□□□ -0.38
CCDC84-207ENST00000533787 GNL1P36915 607 aaPredicted RBP12.66□□□□□ -0.38
CCDC84-207ENST00000533787 ZNF33AQ06730 810 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 RABEP1Q15276 862 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 SURF1Q15526 300 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 RRAGBQ5VZM2 374 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 TRMT11Q7Z4G4 463 aaKnown RBP12.66□□□□□ -0.38
CCDC84-207ENST00000533787 RABEPKQ7Z6M1 372 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 CBWD2Q8IUF1 395 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 WDR49Q8IV35 697 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 CHCHD4Q8N4Q1 142 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 ZNF513Q8N8E2 541 aaPredicted RBP12.66□□□□□ -0.38
CCDC84-207ENST00000533787 NAT16Q8N8M0 369 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 OR2I1PQ8NGU4 316 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 OR6B3Q8NGW1 331 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 KCNV2Q8TDN2 545 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 OTUB2Q96DC9 234 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 ZFRQ96KR1 1074 aaKnown RBP12.66□□□□□ -0.38
CCDC84-207ENST00000533787 SNX25Q9H3E2 840 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 DPEP3Q9H4B8 488 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 PANK4Q9NVE7 773 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 CALCOCO1Q9P1Z2 691 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 FBXO2Q9UK22 296 aaPredicted RBP12.66□□□□□ -0.38
CCDC84-207ENST00000533787 CLIC4Q9Y696 253 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 ADAMTS20P59510 1910 aa12.66□□□□□ -0.38
CCDC84-207ENST00000533787 DSPP15924 2871 aaKnown RBP12.65□□□□□ -0.38
CCDC84-207ENST00000533787 CLDN5O00501 218 aa12.65□□□□□ -0.38
CCDC84-207ENST00000533787 HOXC11O43248 304 aaPredicted RBP12.65□□□□□ -0.38
CCDC84-207ENST00000533787 TACC1O75410 805 aa12.65□□□□□ -0.38
CCDC84-207ENST00000533787 CST3P01034 146 aaPredicted RBP12.65□□□□□ -0.38
CCDC84-207ENST00000533787 CAPNS1P04632 268 aa12.65□□□□□ -0.38
CCDC84-207ENST00000533787 CD59P13987 128 aa12.65□□□□□ -0.38
CCDC84-207ENST00000533787 HOXB2P14652 356 aa12.65□□□□□ -0.38
CCDC84-207ENST00000533787 PTPN1P18031 435 aaKnown RBP12.65□□□□□ -0.38
CCDC84-207ENST00000533787 YWHAQP27348 245 aa12.65□□□□□ -0.38
CCDC84-207ENST00000533787 ZNF423Q2M1K9 1284 aa12.65□□□□□ -0.38
CCDC84-207ENST00000533787 C10orf76Q5T2E6 689 aa12.65□□□□□ -0.38
CCDC84-207ENST00000533787 BTBD8Q5XKL5 378 aa12.65□□□□□ -0.38
CCDC84-207ENST00000533787 TRAPPC11Q7Z392 1133 aa12.65□□□□□ -0.38
CCDC84-207ENST00000533787 RAB44Q7Z6P3 723 aaPredicted RBP12.65□□□□□ -0.38
CCDC84-207ENST00000533787 PROSER1Q86XN7 944 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms