RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 CDT1Q9H211 546 aa12.89□□□□□ -0.35
RAD50-209ENST00000533482 KRT82Q9NSB4 513 aa12.89□□□□□ -0.35
RAD50-209ENST00000533482 CASZ1Q86V15 1759 aa12.89□□□□□ -0.35
RAD50-209ENST00000533482 PHLPP1O60346 1717 aa12.89□□□□□ -0.35
RAD50-209ENST00000533482 USP2O75604 605 aaPredicted RBP12.89□□□□□ -0.35
RAD50-209ENST00000533482 LCA5LO95447 670 aa12.89□□□□□ -0.35
RAD50-209ENST00000533482 PAMP19021 973 aa12.89□□□□□ -0.35
RAD50-209ENST00000533482 FSCBQ5H9T9 825 aa12.89□□□□□ -0.35
RAD50-209ENST00000533482 NETO2Q8NC67 525 aa12.89□□□□□ -0.35
RAD50-209ENST00000533482 SLC2A14Q8TDB8 520 aa12.89□□□□□ -0.35
RAD50-209ENST00000533482 PGM2Q96G03 612 aa12.89□□□□□ -0.35
RAD50-209ENST00000533482 SLC39A10Q9ULF5 831 aa12.89□□□□□ -0.35
RAD50-209ENST00000533482 R3HDM2Q9Y2K5 976 aaKnown RBP12.89□□□□□ -0.35
RAD50-209ENST00000533482 L3MBTL1Q9Y468 752 aa12.89□□□□□ -0.35
RAD50-209ENST00000533482 KBTBD13C9JR72 458 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 LSM8O95777 96 aaKnown RBP12.88□□□□□ -0.35
RAD50-209ENST00000533482 BGNP21810 368 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 SOX11P35716 441 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 MMP14P50281 582 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 HIRAP54198 1017 aaPredicted RBP12.88□□□□□ -0.35
RAD50-209ENST00000533482 C12orf29Q8N999 325 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 LRRC57Q8N9N7 239 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 FAM136AQ96C01 138 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 TASP1Q9H6P5 420 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 WDCPQ9H6R7 721 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 COL14A1Q05707 1796 aaKnown RBP12.88□□□□□ -0.35
RAD50-209ENST00000533482 CYP1A2P05177 515 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 CCDC130P13994 396 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 NQO1P15559 274 aaKnown RBP12.88□□□□□ -0.35
RAD50-209ENST00000533482 ANKRD20A8PQ5CZ79 823 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 LBX2Q6XYB7 198 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 RNF180Q86T96 592 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 AGGF1Q8N302 714 aaeCLIP12.88□□□□□ -0.358e-7■□□□□ 10.6
RAD50-209ENST00000533482 ATPAF2Q8N5M1 289 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 MAGEB18Q96M61 343 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 SERPINI1Q99574 410 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 SYT17Q9BSW7 474 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 PCDH9Q9HC56 1237 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 NDE1Q9NXR1 346 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 BARX2Q9UMQ3 279 aaPredicted RBP12.88□□□□□ -0.35
RAD50-209ENST00000533482 DGKIO75912 1065 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 MICAL2O94851 1124 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 FARP2O94887 1054 aaPredicted RBP12.88□□□□□ -0.35
RAD50-209ENST00000533482 TTC39BQ5VTQ0 682 aaPredicted RBP12.88□□□□□ -0.35
RAD50-209ENST00000533482 SLC27A1Q6PCB7 646 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 LRRC43Q8N309 656 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 MREGQ8N565 214 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 EFHBQ8N7U6 833 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 TCP10LQ8TDR4 215 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 TMEM237Q96Q45 408 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 TRIM4Q9C037 500 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 DDX43Q9NXZ2 648 aaKnown RBP12.88□□□□□ -0.35
RAD50-209ENST00000533482 AP4E1Q9UPM8 1137 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 NCANO14594 1321 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 BTNL10A8MVZ5 291 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 KCNK1O00180 336 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 ENDOD1O94919 500 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 YWHAHQ04917 246 aaPredicted RBP12.88□□□□□ -0.35
RAD50-209ENST00000533482 ADIGQ0VDE8 80 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 PPIL2Q13356 520 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 MFSD10Q14728 455 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 PDK1Q15118 436 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 C10orf120Q5SQS8 335 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 FOXR2Q6PJQ5 311 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 CES3Q6UWW8 571 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 NPNTQ6UXI9 565 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 ABHD15Q6UXT9 468 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.88□□□□□ -0.35
RAD50-209ENST00000533482 PDZD8Q8NEN9 1154 aa12.88□□□□□ -0.35
RAD50-209ENST00000533482 TFB1MQ8WVM0 346 aaKnown RBP12.88□□□□□ -0.35
RAD50-209ENST00000533482 AIM2O14862 343 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 MYL2P10916 166 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 ACADSBP45954 432 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 TKTL1P51854 596 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 ASTE1Q2TB18 679 aaPredicted RBP12.87□□□□□ -0.35
RAD50-209ENST00000533482 USP50Q70EL3 339 aaPredicted RBP12.87□□□□□ -0.35
RAD50-209ENST00000533482 PRPF39Q86UA1 669 aaKnown RBP12.87□□□□□ -0.35
RAD50-209ENST00000533482 DAW1Q8N136 415 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 TTC8Q8TAM2 541 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 LENG1Q96BZ8 264 aaPredicted RBP12.87□□□□□ -0.35
RAD50-209ENST00000533482 MTBPQ96DY7 904 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 CELF6Q96J87 481 aaKnown RBP12.87□□□□□ -0.35
RAD50-209ENST00000533482 VCPIP1Q96JH7 1222 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 UNKQ9C0B0 810 aaKnown RBP12.87□□□□□ -0.35
RAD50-209ENST00000533482 RNPEPQ9H4A4 650 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 VTA1Q9NP79 307 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 UMODL1Q5DID0 1318 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 DDX3YO15523 660 aaKnown RBP12.87□□□□□ -0.35
RAD50-209ENST00000533482 CST3P01034 146 aaPredicted RBP12.87□□□□□ -0.35
RAD50-209ENST00000533482 LMNAP02545 664 aaKnown RBP12.87□□□□□ -0.35
RAD50-209ENST00000533482 POLBP06746 335 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 TCN1P20061 433 aaPredicted RBP12.87□□□□□ -0.35
RAD50-209ENST00000533482 TAC1P20366 129 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 ADRA1DP25100 572 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 PNPLA4P41247 253 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 NOMO3P69849 1222 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 FAM182AQ5T1J6 154 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 PCYOX1Q9UHG3 505 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 MCF2P10911 925 aa12.87□□□□□ -0.35
RAD50-209ENST00000533482 ENO3P13929 434 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms