RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 SMG5Q9UPR3 1016 aaKnown RBP11.72□□□□□ -0.53
PTPRK-221ENST00000532331 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.72□□□□□ -0.53
PTPRK-221ENST00000532331 TSPAN3O60637 253 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 CST8O60676 142 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 PYGLP06737 847 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 SP100P23497 879 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-221ENST00000532331 PAX3P23760 479 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 PLPP4Q5VZY2 271 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 MTBPQ96DY7 904 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 IL17RAQ96F46 866 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 SEZ6LQ9BYH1 1024 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 PCDHGB4Q9UN71 923 aa11.72□□□□□ -0.53
PTPRK-221ENST00000532331 LOC102724159A0A0B4J2E5 919 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 FRMD3A2A2Y4 597 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 GEMP55040 296 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 PWP2Q15269 919 aaKnown RBP11.71□□□□□ -0.53
PTPRK-221ENST00000532331 SV2AQ7L0J3 742 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 WWP1Q9H0M0 922 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 PPCSQ9HAB8 311 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 NOP53Q9NZM5 478 aaKnown RBP11.71□□□□□ -0.53
PTPRK-221ENST00000532331 RPTORQ8N122 1335 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 UNCXA6NJT0 531 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 SGPL1O95470 568 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 GYPCP04921 128 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 GJB1P08034 283 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 VSNL1P62760 191 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 PRKCQQ04759 706 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 C4orf22Q6V702 233 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 LINC00523Q86TU6 105 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 TNS4Q8IZW8 715 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 TRIML2Q8N7C3 387 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 FAM172AQ8WUF8 416 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 LPPQ93052 612 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 SERPINB11Q96P15 392 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 RRN3Q9NYV6 651 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 SPG21Q9NZD8 308 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 GIT1Q9Y2X7 761 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 KNDC1Q76NI1 1749 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 TBC1D3BA6NDS4 549 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 MEIS2O14770 477 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 ZW10O43264 779 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 NOL9Q5SY16 702 aaKnown RBP11.71□□□□□ -0.53
PTPRK-221ENST00000532331 RGL4Q8IZJ4 473 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 ABRAQ8N0Z2 381 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 EDEM1Q92611 657 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 KDM4CQ9H3R0 1056 aa11.71□□□□□ -0.53
PTPRK-221ENST00000532331 COL1A2P08123 1366 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 SMIM35A0A1B0GVV1 85 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 GLUD1P00367 558 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 BDNFP23560 247 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 PON1P27169 355 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 KLK7P49862 253 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 CENPCQ03188 943 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 EIF2B5Q13144 721 aaKnown RBP11.71□□□□□ -0.54
PTPRK-221ENST00000532331 TERF2Q15554 542 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 ERAP2Q6P179 960 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 RAD9BQ6WBX8 426 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 NSMCE4AQ9NXX6 385 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 TNFSF13BQ9Y275 285 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 ALG6Q9Y672 507 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 CAND2O75155 1236 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 CDH16O75309 829 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 PMPCBO75439 489 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 PSMD5Q16401 504 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 ST13P4Q8IZP2 240 aaPredicted RBP11.71□□□□□ -0.54
PTPRK-221ENST00000532331 KIRREL3Q8IZU9 778 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 ELMO2Q96JJ3 720 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 XAB2Q9HCS7 855 aaKnown RBP11.71□□□□□ -0.54
PTPRK-221ENST00000532331 ADAMTSL3P82987 1691 aa11.71□□□□□ -0.54
PTPRK-221ENST00000532331 FOXN3O00409 490 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-221ENST00000532331 NDUFS2O75306 463 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 SPAG6O75602 509 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 PSMD10O75832 226 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 LSM8O95777 96 aaKnown RBP11.7□□□□□ -0.54
PTPRK-221ENST00000532331 ATP5BP06576 529 aaKnown RBP11.7□□□□□ -0.54
PTPRK-221ENST00000532331 PTGER2P43116 358 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 LRIG3Q6UXM1 1119 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 FBXL16Q8N461 479 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 TMA16Q96EY4 203 aaKnown RBP11.7□□□□□ -0.54
PTPRK-221ENST00000532331 TSPAN16Q9UKR8 245 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 USP20Q9Y2K6 914 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 HMOX2P30519 316 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 ADIGQ0VDE8 80 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 GRIK3Q13003 919 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 SUSD6Q92537 303 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 ZBTB45Q96K62 511 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-221ENST00000532331 PSMC3IPQ9P2W1 217 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-221ENST00000532331 VPS9D1Q9Y2B5 631 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 CHUKO15111 745 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 GLRA2P23416 452 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 ZNF200P98182 395 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-221ENST00000532331 USP10Q14694 798 aaKnown RBP11.7□□□□□ -0.54
PTPRK-221ENST00000532331 MAP4K3Q8IVH8 894 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 BLOC1S5Q8TDH9 187 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 TRIM10Q9UDY6 481 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 H0Y3Z8 333 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 CYP11B1P15538 503 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 POLR2EP19388 210 aaKnown RBP11.7□□□□□ -0.54
PTPRK-221ENST00000532331 CHRM3P20309 590 aa11.7□□□□□ -0.54
PTPRK-221ENST00000532331 ENGASEQ8NFI3 743 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms