RNA–Protein interactions for RNA: ENST00000529938.1

AP002884.3-204, humanhuman

TSL 1 (best)

Gene AP002884.3, Length 1,166 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-204ENST00000529938 TMEM30AQ9NV96 361 aa15.92■□□□□ 0.14
AP002884.3-204ENST00000529938 RMND1Q9NWS8 449 aa15.92■□□□□ 0.14
AP002884.3-204ENST00000529938 OBP2AQ9NY56 170 aa15.92■□□□□ 0.14
AP002884.3-204ENST00000529938 GTSE1Q9NYZ3 720 aa15.92■□□□□ 0.14
AP002884.3-204ENST00000529938 SETXQ7Z333 2677 aaKnown RBP15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 LAMA1P25391 3075 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 DSPP15924 2871 aaKnown RBP15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 F8VP50 259 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 GADD45BO75293 160 aaPredicted RBP15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 SMC2O95347 1197 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 CSRP1P21291 193 aaKnown RBP15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 DDX6P26196 483 aaKnown RBP eCLIP15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 ANXA13P27216 316 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 PIK3CAP42336 1068 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 TNK2Q07912 1038 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 ORC1Q13415 861 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 ARHGAP29Q52LW3 1261 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 ZNF658Q5TYW1 1059 aaPredicted RBP15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 DENND5BQ6ZUT9 1274 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 TAS1R2Q8TE23 839 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 SMARCE1Q969G3 411 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 SPATA17Q96L03 361 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 TIGD1Q96MW7 591 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 GSDMAQ96QA5 445 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 SLC22A12Q96S37 553 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 TDP1Q9NUW8 608 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 WDFY3Q8IZQ1 3526 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 DMXL2Q8TDJ6 3036 aa15.91■□□□□ 0.14
AP002884.3-204ENST00000529938 TRIM66O15016 1216 aa15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 CAVIN2O95810 425 aa15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 ASS1P00966 412 aaKnown RBP15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 PMS1P54277 932 aaKnown RBP15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 EDRF1Q3B7T1 1238 aa15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 PKN3Q6P5Z2 889 aa15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 ACOT1Q86TX2 421 aa15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 TTC16Q8NEE8 873 aa15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 SPATA20Q8TB22 786 aa15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 RIN3Q8TB24 985 aa15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 TAF4BQ92750 862 aa15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 C8orf48Q96LL4 319 aa15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 MED10Q9BTT4 135 aa15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 APOBEC3GQ9HC16 384 aaKnown RBP15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 GKN1Q9NS71 199 aa15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 THG1LQ9NWX6 298 aaKnown RBP15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 ZMYM5Q9UJ78 669 aa15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 AKAP13Q12802 2813 aa15.9■□□□□ 0.14
AP002884.3-204ENST00000529938 FLNBO75369 2602 aaKnown RBP15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 C2orf78A6NCI8 922 aa15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 CETN3O15182 167 aa15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 P4HA1P13674 534 aa15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 ASPAP45381 313 aa15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 NDST1P52848 882 aa15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 IFRD2Q12894 506 aaPredicted RBP15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 ANKRD40Q6AI12 368 aa15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 TRIM68Q6AZZ1 485 aa15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 PAQR9Q6ZVX9 377 aa15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 ARL14EPQ8N8R7 260 aaPredicted RBP15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 TNIP3Q96KP6 325 aa15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 KCNK16Q96T55 309 aa15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 ELOVL4Q9GZR5 314 aa15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 DUSP15Q9H1R2 295 aaPredicted RBP15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 HMGXB4Q9UGU5 601 aa15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 HOOK1Q9UJC3 728 aaKnown RBP15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 SLC8A2Q9UPR5 921 aa15.89■□□□□ 0.13
AP002884.3-204ENST00000529938 LNP1A1A4G5 178 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 BCLAF3A2AJT9 711 aaKnown RBP15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 TRIM49BA6NDI0 452 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 RHOBTB1O94844 696 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 CKMP06732 381 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 PLCB2Q00722 1185 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 CREB5Q02930 508 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 SOWAHCQ53LP3 525 aaPredicted RBP15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 CAMKK1Q8N5S9 505 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 C12orf29Q8N999 325 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 TSG101Q99816 390 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 FAM83CQ9BQN1 747 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 EBF3Q9H4W6 596 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 TMEM8AQ9HCN3 771 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 TRPM5Q9NZQ8 1165 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 GCNT4Q9P109 453 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 MAN1B1Q9UKM7 699 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 NEUROG3Q9Y4Z2 214 aa15.88■□□□□ 0.13
AP002884.3-204ENST00000529938 ATG2BQ96BY7 2078 aa15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 TRAV19A0A0A6YYK7 116 aa15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 PCNX2A6NKB5 2137 aa15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 ATG13O75143 517 aa15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 ABL1P00519 1130 aa15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 USP17L7P0C7H9 530 aa15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 EPB41P11171 864 aaKnown RBP15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 CCDC130P13994 396 aa15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 HDCP19113 662 aa15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 NOP14P78316 857 aaKnown RBP15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 TAF10Q12962 218 aa15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 ELF2Q15723 593 aa15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 COBLL1Q53SF7 1204 aa15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 KRT39Q6A163 491 aa15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 FAM35AQ86V20 835 aa15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 FUKQ8N0W3 1084 aa15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 SEMA4DQ92854 862 aa15.87■□□□□ 0.13
AP002884.3-204ENST00000529938 CEP295NLQ96MC4 621 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms