RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 TAS1R1Q7RTX1 841 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 SZRD1Q7Z422 152 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 ANKRD13BQ86YJ7 626 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 RAB11FIP4Q86YS3 637 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 CCDC170Q8IYT3 715 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 SAMD14Q8IZD0 417 aaPredicted RBP5.33□□□□□ -1.56
CTR9-203ENST00000526874 CMTM4Q8IZR5 234 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 ZNF808Q8N4W9 903 aaPredicted RBP5.33□□□□□ -1.56
CTR9-203ENST00000526874 LSM14AQ8ND56 463 aaKnown RBP5.33□□□□□ -1.56
CTR9-203ENST00000526874 C3orf20Q8ND61 904 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 OR5M3Q8NGP4 307 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 RSAD2Q8WXG1 361 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 NMD3Q96D46 503 aaKnown RBP5.33□□□□□ -1.56
CTR9-203ENST00000526874 TSGA13Q96PP4 275 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 EYA3Q99504 573 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 PRPF18Q99633 342 aaKnown RBP5.33□□□□□ -1.56
CTR9-203ENST00000526874 VRK1Q99986 396 aaPredicted RBP5.33□□□□□ -1.56
CTR9-203ENST00000526874 TCF25Q9BQ70 676 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 TAF1DQ9H5J8 278 aaPredicted RBP5.33□□□□□ -1.56
CTR9-203ENST00000526874 EPS8L2Q9H6S3 715 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 TMEM8AQ9HCN3 771 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 NECTIN3Q9NQS3 549 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 EIF2B3Q9NR50 452 aaKnown RBP5.33□□□□□ -1.56
CTR9-203ENST00000526874 LPAR3Q9UBY5 353 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.33□□□□□ -1.56
CTR9-203ENST00000526874 RRP15Q9Y3B9 282 aaKnown RBP5.33□□□□□ -1.56
CTR9-203ENST00000526874 PCDHA1Q9Y5I3 950 aa5.33□□□□□ -1.56
CTR9-203ENST00000526874 CLCA1A8K7I4 914 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 B8ZZF3 427 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 THAP12O43422 761 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 ACTL6BO94805 426 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 SCGB1D1O95968 90 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 TK1P04183 234 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 ITGA2BP08514 1039 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 THEGLP0DJG4 465 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 CSH1P0DML2 217 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 CSH2P0DML3 217 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 NR2F1P10589 423 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 IL1R1P14778 569 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 DESP17661 470 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 TGM1P22735 817 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 ATP5F1P24539 256 aaPredicted RBP5.32□□□□□ -1.56
CTR9-203ENST00000526874 HADHAP40939 763 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 RGS2P41220 211 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 ARFIP2P53365 341 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 ACTR2P61160 394 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 MRPS35P82673 323 aaKnown RBP5.32□□□□□ -1.56
CTR9-203ENST00000526874 CALD1Q05682 793 aaKnown RBP5.32□□□□□ -1.56
CTR9-203ENST00000526874 DUSP2Q05923 314 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 NOMO1Q15155 1222 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 TBCEQ15813 527 aaPredicted RBP5.32□□□□□ -1.56
CTR9-203ENST00000526874 TBCCQ15814 346 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 TMEM266Q2M3C6 531 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 GAGE13Q4V321 117 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 KHDC1Q4VXA5 237 aaKnown RBP5.32□□□□□ -1.56
CTR9-203ENST00000526874 SETMARQ53H47 684 aaPredicted RBP5.32□□□□□ -1.56
CTR9-203ENST00000526874 KRTCAP3Q53RY4 240 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 MUM1L1Q5H9M0 696 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 NAA16Q6N069 864 aaPredicted RBP5.32□□□□□ -1.56
CTR9-203ENST00000526874 CNSTQ6PJW8 725 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 BTNL9Q6UXG8 535 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 DENND5BQ6ZUT9 1274 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 UNC13DQ70J99 1090 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 H1FNTQ75WM6 255 aaPredicted RBP5.32□□□□□ -1.56
CTR9-203ENST00000526874 RRAGAQ7L523 313 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 PRRT2Q7Z6L0 340 aaPredicted RBP5.32□□□□□ -1.56
CTR9-203ENST00000526874 PXKQ7Z7A4 578 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 PPP1R3BQ86XI6 285 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 ZNF619Q8N2I2 560 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 D2HGDHQ8N465 521 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 LILRA3Q8N6C8 439 aaPredicted RBP5.32□□□□□ -1.56
CTR9-203ENST00000526874 REPS2Q8NFH8 660 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 DNERQ8NFT8 737 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 MDM1Q8TC05 714 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 SNX33Q8WV41 574 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 FATE1Q969F0 183 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 SUCLG2Q96I99 432 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 ZNF845Q96IR2 970 aaPredicted RBP5.32□□□□□ -1.56
CTR9-203ENST00000526874 CLPTM1LQ96KA5 538 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 FNBP1Q96RU3 617 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 TRIM54Q9BYV2 358 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 EDEM3Q9BZQ6 932 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 EPC1Q9H2F5 836 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 DEF6Q9H4E7 631 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 LDAHQ9H6V9 325 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 BRF2Q9HAW0 419 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 SEPSECSQ9HD40 501 aaKnown RBP5.32□□□□□ -1.56
CTR9-203ENST00000526874 SERHLQ9NQF3 203 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 PRDM8Q9NQV8 689 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 RGL1Q9NZL6 768 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 ZNF215Q9UL58 517 aaPredicted RBP5.32□□□□□ -1.56
CTR9-203ENST00000526874 HS3ST4Q9Y661 456 aa5.32□□□□□ -1.56
CTR9-203ENST00000526874 ZMYM3Q14202 1370 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 PASKQ96RG2 1323 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 TRIM43BA6NCK2 446 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 INO80B-WBP1J3KQ70 363 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 GTPBP1O00178 669 aaKnown RBP5.31□□□□□ -1.56
CTR9-203ENST00000526874 WNT10BO00744 389 aa5.31□□□□□ -1.56
CTR9-203ENST00000526874 TBCAO75347 108 aaKnown RBP5.31□□□□□ -1.56
CTR9-203ENST00000526874 ACO1P21399 889 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 2322.9 ms