RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ZFYVE19Q96K21 471 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 ZBTB40Q9NUA8 1239 aa3.47□□□□□ -1.85
ECHDC1-219ENST00000526299 LACTBL1A8MY62 500 aa3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 SLC28A2O43868 658 aa3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 CNOT3O75175 753 aaKnown RBP3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 POU2F2P09086 479 aa3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 CYP2C9P11712 490 aa3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 KCNA3P22001 575 aa3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 SUMO2P61956 95 aaKnown RBP3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 RPS13P62277 151 aaKnown RBP3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 CFHR1Q03591 330 aa3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 LMAN2Q12907 356 aa3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 FAM50AQ14320 339 aaKnown RBP3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 MLC1Q15049 377 aa3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 MGAT5BQ3V5L5 792 aa3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 RFX6Q8HWS3 928 aa3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 CELF5Q8N6W0 485 aaKnown RBP3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 IGFBPL1Q8WX77 278 aa3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 RSPRY1Q96DX4 576 aa3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 MESP1Q9BRJ9 268 aa3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 ARMT1Q9H993 441 aa3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 GBA2Q9HCG7 927 aaPredicted RBP3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 CPA4Q9UI42 421 aa3.46□□□□□ -1.86
ECHDC1-219ENST00000526299 THP07101 528 aa3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 XRCC6P12956 609 aaKnown RBP eCLIP3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 APEHP13798 732 aaKnown RBP3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 PLA2G2AP14555 144 aa3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 TNFRSF1BP20333 461 aa3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 KRTAP5-9P26371 169 aa3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 SLC11A2P49281 568 aa3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 STIM1Q13586 685 aa3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 PGS1Q32NB8 556 aa3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 PTCHD3Q3KNS1 767 aa3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 DGKKQ5KSL6 1271 aa3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 ATG9BQ674R7 924 aa3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 PTCHD4Q6ZW05 846 aa3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 SLC15A4Q8N697 577 aa3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 B4GALNT2Q8NHY0 566 aa3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 SLC13A1Q9BZW2 595 aa3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 MGAT4CQ9UBM8 478 aa3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.45□□□□□ -1.86
ECHDC1-219ENST00000526299 IFITM10A6NMD0 228 aa3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 CREB1P16220 341 aa3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 CPA2P48052 419 aa3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 ZXDBP98169 803 aa3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 MTX1Q13505 466 aa3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 LARS2Q15031 903 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 DCDC5Q6ZRR9 648 aa3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 CATIPQ7Z7H3 387 aa3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 RAB11FIP4Q86YS3 637 aa3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 MMP21Q8N119 569 aa3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 DNAJC5GQ8N7S2 189 aa3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 MAFAQ8NHW3 353 aaPredicted RBP3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 BPIFB1Q8TDL5 484 aa3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 ZNF479Q96JC4 524 aa3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 HS6ST2Q96MM7 605 aa3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 ZSCAN32Q9NX65 697 aa3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 USP22Q9UPT9 525 aa3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 DRG1Q9Y295 367 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-219ENST00000526299 SNUPNO95149 360 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 ATF7P17544 494 aaPredicted RBP3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 CDK11BP21127 795 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 PRKAR1BP31321 381 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 DIO1P49895 249 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 WNT3P56703 355 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 YPEL5P62699 121 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 ZNF750Q32MQ0 723 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 SLC9C1Q4G0N8 1177 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 PLA1AQ53H76 456 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 MANEAQ5SRI9 462 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 CC2D1BQ5T0F9 858 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 TMEM63BQ5T3F8 832 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 DENND2CQ68D51 928 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 VSTM1Q6UX27 236 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 SPARTQ8N0X7 666 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 RAPGEF4Q8WZA2 1011 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 CDK5RAP3Q96JB5 506 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 LMLNQ96KR4 655 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 TMX1Q9H3N1 280 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 CNNM1Q9NRU3 951 aa3.43□□□□□ -1.86
ECHDC1-219ENST00000526299 IGLV5-39A0A0G2JS06 123 aa3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 CLIC1O00299 241 aa3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 IL33O95760 270 aa3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 NGFRP08138 427 aa3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 FGF2P09038 288 aa3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 RECQLP46063 649 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 EVA1CP58658 441 aa3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 CCNIQ14094 377 aa3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 MPLKIPQ8TAP9 179 aa3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 ASB5Q8WWX0 329 aa3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 SLC25A28Q96A46 364 aa3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 CTHRC1Q96CG8 243 aa3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 P2RX7Q99572 595 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 GTPBP4Q9BZE4 634 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 MS4A7Q9GZW8 240 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 MRPL44Q9H9J2 332 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 SPC25Q9HBM1 224 aa3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 SNX15Q9NRS6 342 aa3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 MAFFQ9ULX9 164 aa3.42□□□□□ -1.86
ECHDC1-219ENST00000526299 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms