RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 MTMR4Q9NYA4 1195 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 HESX1Q9UBX0 185 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 MCM8Q9UJA3 840 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 GABRQQ9UN88 632 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 SH2B3Q9UQQ2 575 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 NR2E3Q9Y5X4 410 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 VPS8Q8N3P4 1428 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 NRKQ7Z2Y5 1582 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 PARP4Q9UKK3 1724 aaKnown RBP2.22□□□□□ -2.05
CD44-212ENST00000524922 PLEKHG2Q9H7P9 1386 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 PLCH1Q4KWH8 1693 aa2.22□□□□□ -2.05
CD44-212ENST00000524922 ZNF521Q96K83 1311 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 PAPPAQ13219 1627 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 SMIM35A0A1B0GVV1 85 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 TCRBV5S1A1TA0A578 114 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 PPEF2O14830 753 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 BCAR3O75815 825 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 NXPH3O95157 252 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 CSF1RP07333 972 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 FAM163BP0C2L3 166 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 TYRP14679 529 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 ITGALP20701 1170 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 PDCP20941 246 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 CDK11BP21127 795 aaKnown RBP2.21□□□□□ -2.06
CD44-212ENST00000524922 PPIFP30405 207 aaKnown RBP2.21□□□□□ -2.06
CD44-212ENST00000524922 CYP2C18P33260 490 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 NR4A2P43354 598 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 GUCY2FP51841 1108 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 MAP2K6P52564 334 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 EEFSECP57772 596 aaKnown RBP2.21□□□□□ -2.06
CD44-212ENST00000524922 NKX6-1P78426 367 aaPredicted RBP2.21□□□□□ -2.06
CD44-212ENST00000524922 QSER1Q2KHR3 1735 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 UAP1L1Q3KQV9 507 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 PLAC9Q5JTB6 97 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 TREML2Q5T2D2 321 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 HEATR3Q7Z4Q2 680 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 WDR53Q7Z5U6 358 aaPredicted RBP2.21□□□□□ -2.06
CD44-212ENST00000524922 KRT73Q86Y46 540 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 AOPEPQ8N6M6 819 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 CELF5Q8N6W0 485 aaKnown RBP2.21□□□□□ -2.06
CD44-212ENST00000524922 DNAJC5GQ8N7S2 189 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 PRPF38AQ8NAV1 312 aaKnown RBP2.21□□□□□ -2.06
CD44-212ENST00000524922 ATG4AQ8WYN0 398 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 NELL2Q99435 816 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 ABCA3Q99758 1704 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 WACQ9BTA9 647 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 WDCPQ9H6R7 721 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 PEAK1Q9H792 1746 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.21□□□□□ -2.06
CD44-212ENST00000524922 SH3BP4Q9P0V3 963 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 ABCF2Q9UG63 623 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 RAD54BQ9Y620 910 aa2.21□□□□□ -2.06
CD44-212ENST00000524922 PDE4DIPQ5VU43 2346 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 PIK3C2GO75747 1445 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 NAIPQ13075 1403 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 SSH2Q76I76 1423 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 ATP10DQ9P241 1426 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 E5RJQ4 531 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 M0QYG6 137 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 SLC16A6O15403 523 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 SLC16A3O15427 465 aaKnown RBP2.2□□□□□ -2.06
CD44-212ENST00000524922 TLR5O60602 858 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 TOMM70O94826 608 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 FESP07332 822 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 GNAI3P08754 354 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 POU2F2P09086 479 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 CYP2D6P10635 497 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 HDCP19113 662 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 GNAI1P63096 354 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 HOXA4Q00056 320 aaPredicted RBP2.2□□□□□ -2.06
CD44-212ENST00000524922 EXOSC9Q06265 439 aaKnown RBP2.2□□□□□ -2.06
CD44-212ENST00000524922 PLS1Q14651 629 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 CYP1B1Q16678 543 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 ZIK1Q3SY52 487 aaPredicted RBP2.2□□□□□ -2.06
CD44-212ENST00000524922 FAM160B1Q5W0V3 765 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 ICE2Q659A1 982 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 FCRL6Q6DN72 434 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 KIRREL2Q6UWL6 708 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 ZNF517Q6ZMY9 492 aaPredicted RBP2.2□□□□□ -2.06
CD44-212ENST00000524922 Q6ZWC4 215 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 USP45Q70EL2 814 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 SLC29A4Q7RTT9 530 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 PIP4P1Q86T03 277 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 FAM46DQ8NEK8 389 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 PLBD2Q8NHP8 589 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 RP9Q8TA86 221 aaKnown RBP2.2□□□□□ -2.06
CD44-212ENST00000524922 CYP2W1Q8TAV3 490 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 ZNF398Q8TD17 642 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 TNPO1Q92973 898 aaKnown RBP2.2□□□□□ -2.06
CD44-212ENST00000524922 RGMAQ96B86 450 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 COQ8BQ96D53 544 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 SLC46A1Q96NT5 459 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 LENG8Q96PV6 779 aaPredicted RBP2.2□□□□□ -2.06
CD44-212ENST00000524922 TMEM79Q9BSE2 394 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 PTDSS2Q9BVG9 487 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 SPC25Q9HBM1 224 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 MAN1C1Q9NR34 630 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 GNL3LQ9NVN8 582 aaKnown RBP2.2□□□□□ -2.06
CD44-212ENST00000524922 ELOVL5Q9NYP7 299 aa2.2□□□□□ -2.06
CD44-212ENST00000524922 SERTAD3Q9UJW9 196 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms