RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 PPP2R3CQ969Q6 453 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 C18orf25Q96B23 403 aaPredicted RBP7.47□□□□□ -1.21
VPS11-201ENST00000524454 ZNF653Q96CK0 615 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 MSLNLQ96KJ4 702 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 SNX27Q96L92 541 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 ZMAT2Q96NC0 199 aaKnown RBP7.47□□□□□ -1.21
VPS11-201ENST00000524454 PCDHB18PQ96TA0 734 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 USB1Q9BQ65 265 aaKnown RBP7.47□□□□□ -1.21
VPS11-201ENST00000524454 ZSWIM1Q9BR11 485 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 HERC2P3Q9BVR0 1158 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 GPR62Q9BZJ7 368 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 ACBD3Q9H3P7 528 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 NGRNQ9NPE2 291 aaKnown RBP7.47□□□□□ -1.21
VPS11-201ENST00000524454 SEPT11Q9NVA2 429 aaKnown RBP7.47□□□□□ -1.21
VPS11-201ENST00000524454 PARVAQ9NVD7 372 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 OGFRQ9NZT2 677 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 WDR35Q9P2L0 1181 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 SIX4Q9UIU6 781 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.47□□□□□ -1.21
VPS11-201ENST00000524454 USP15Q9Y4E8 981 aaPredicted RBP7.47□□□□□ -1.21
VPS11-201ENST00000524454 PCDHB4Q9Y5E5 795 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 HCFC2Q9Y5Z7 792 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 ALG6Q9Y672 507 aa7.47□□□□□ -1.21
VPS11-201ENST00000524454 SMIM28A0A1B0GU29 152 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 LACTBL1A8MY62 500 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 PDE2AO00408 941 aaPredicted RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 DDX3YO15523 660 aaKnown RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 PSTPIP1O43586 416 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 SRGAP2O75044 1071 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 CILPO75339 1184 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 TADA2AO75478 443 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 CST3P01034 146 aaPredicted RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 SOD2P04179 222 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 URODP06132 367 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 CNPP09543 421 aaKnown RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 SETSIPP0DME0 302 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 ABCB4P21439 1286 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 CLCNKBP51801 687 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 GUCY2FP51841 1108 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 SNX16P57768 344 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 GPS2Q13227 327 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 TUSC3Q13454 348 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 SMAD4Q13485 552 aaKnown RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 CUL1Q13616 776 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 KCNC3Q14003 757 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 DHX34Q14147 1143 aaKnown RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 NAA30Q147X3 362 aaPredicted RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 ACAP1Q15027 740 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 RTP2Q5QGT7 225 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 BEND6Q5SZJ8 279 aaPredicted RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 RARS2Q5T160 578 aaKnown RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 JADE1Q6IE81 842 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 PDE12Q6L8Q7 609 aaKnown RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 ANKRD54Q6NXT1 300 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 SYCE2Q6PIF2 218 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 DPH6Q7L8W6 267 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 HDXQ7Z353 690 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 MAATS1Q7Z4T9 603 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 UNC93AQ86WB7 457 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 CEP57Q86XR8 500 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 IFT20Q8IY31 132 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 C12orf50Q8NA57 414 aaPredicted RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 C3orf58Q8NDZ4 430 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 BEST2Q8NFU1 509 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 SPATA18Q8TC71 538 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 ZNF606Q8WXB4 792 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 RIN2Q8WYP3 895 aaPredicted RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 RSPH1Q8WYR4 309 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 SEC14L1Q92503 715 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 TSC1Q92574 1164 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 SLCO2A1Q92959 643 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 ARHGEF26Q96DR7 871 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 ZNF560Q96MR9 790 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 KLHL5Q96PQ7 755 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 PPP1R10Q96QC0 940 aaKnown RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 ARID3AQ99856 593 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 NCAPGQ9BPX3 1015 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 PI4K2AQ9BTU6 479 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 NUP85Q9BW27 656 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 COLEC11Q9BWP8 271 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 OSGEPQ9NPF4 335 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 CYLDQ9NQC7 956 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 HOMER3Q9NSC5 361 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 TAS2R14Q9NYV8 317 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 CNOT8Q9UFF9 292 aaKnown RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 TUBGCP4Q9UGJ1 667 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.46□□□□□ -1.22
VPS11-201ENST00000524454 ADAM28Q9UKQ2 775 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 UBQLN1Q9UMX0 589 aaKnown RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 L1RE1Q9UN81 338 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 PCDHA3Q9Y5H8 950 aa7.46□□□□□ -1.22
VPS11-201ENST00000524454 V9GYY5 206 aaPredicted RBP7.46□□□□□ -1.22
VPS11-201ENST00000524454 DENND4AQ7Z401 1863 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 MTCL1Q9Y4B5 1905 aaKnown RBP7.45□□□□□ -1.22
VPS11-201ENST00000524454 TMCO5BA8MYB1 307 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 CFAP99D6REC4 459 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 MYO1FO00160 1098 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 MAP2K7O14733 419 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 ZNF185O15231 689 aa7.45□□□□□ -1.22
VPS11-201ENST00000524454 TEX28O15482 410 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms