RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 CHFRQ96EP1 664 aa9.4□□□□□ -0.9
CTNNA1-240ENST00000523912 LOXL4Q96JB6 756 aa9.4□□□□□ -0.9
CTNNA1-240ENST00000523912 CYP3A43Q9HB55 503 aa9.4□□□□□ -0.9
CTNNA1-240ENST00000523912 SEMA4GQ9NTN9 838 aa9.4□□□□□ -0.9
CTNNA1-240ENST00000523912 RMND1Q9NWS8 449 aa9.4□□□□□ -0.9
CTNNA1-240ENST00000523912 CFAP97Q9P2B7 532 aa9.4□□□□□ -0.9
CTNNA1-240ENST00000523912 SH3BP1Q9Y3L3 701 aa9.4□□□□□ -0.9
CTNNA1-240ENST00000523912 DMXL1Q9Y485 3027 aa9.4□□□□□ -0.9
CTNNA1-240ENST00000523912 SDK1Q7Z5N4 2213 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 AXIN1O15169 862 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 HRO43593 1189 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 VNN1O95497 513 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 HLA-DRAP01903 254 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 EPB41P11171 864 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 GTF2H1P32780 548 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 EIF2DP41214 584 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 ASPAP45381 313 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 NDST1P52848 882 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 CACNA2D1P54289 1103 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 CDH8P55286 799 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 DPYDQ12882 1025 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 SRSF5Q13243 272 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 ELF2Q15723 593 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 ST3GAL2Q16842 350 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 PPM1JQ5JR12 505 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 BTBD8Q5XKL5 378 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 NUDT18Q6ZVK8 323 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 SV2AQ7L0J3 742 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 SYT13Q7L8C5 426 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 TADA2BQ86TJ2 420 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 ACOT1Q86TX2 421 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 GUF1Q8N442 669 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 TTC39CQ8N584 583 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 SLC2A14Q8TDB8 520 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 OTUB2Q96DC9 234 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 HHIPQ96QV1 700 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 TSG101Q99816 390 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 GTPBP4Q9BZE4 634 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 NIF3L1Q9GZT8 377 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 GMIPQ9P107 970 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 HOOK1Q9UJC3 728 aaKnown RBP9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 NME7Q9Y5B8 376 aa9.39□□□□□ -0.91
CTNNA1-240ENST00000523912 E2F8A0AVK6 867 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 ALDH1A2O94788 518 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 RHOBTB1O94844 696 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 SMC2O95347 1197 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 APODP05090 189 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 CYP17A1P05093 508 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 PRR29P0C7W0 189 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 ADH5P11766 374 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 CCDC130P13994 396 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 GCLMP48507 274 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 SEC13P55735 322 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 DLG4P78352 724 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 SHC2P98077 582 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 INCA1Q0VD86 236 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 ADAM9Q13443 819 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 DMC1Q14565 340 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 DHCR24Q15392 516 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 EDRF1Q3B7T1 1238 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 HSF5Q4G112 596 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 KRT39Q6A163 491 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 PKN3Q6P5Z2 889 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 FUKQ8N0W3 1084 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 CRYBG2Q8N1P7 616 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 FAM160A2Q8N612 972 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 C12orf50Q8NA57 414 aaPredicted RBP9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 SCAMP5Q8TAC9 235 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 KCNK16Q96T55 309 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 NT5C1AQ9BXI3 368 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 LINC00597Q9H2U6 94 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 MMRN2Q9H8L6 949 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 TMEM8AQ9HCN3 771 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 TLR8Q9NR97 1041 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 FAM49BQ9NUQ9 324 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 C2orf42Q9NWW7 574 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 LSM7Q9UK45 103 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 MAPK8IP1Q9UQF2 711 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 PCDHGA5Q9Y5G8 931 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 PCDHA5Q9Y5H7 936 aa9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.38□□□□□ -0.91
CTNNA1-240ENST00000523912 CHD8Q9HCK8 2581 aa9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 KIF26AQ9ULI4 1882 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 CETN3O15182 167 aa9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 SLC16A3O15427 465 aaKnown RBP9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 COCHO43405 550 aa9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 TLR5O60602 858 aa9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 ZNF202O95125 648 aa9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 EPN2O95208 641 aa9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 TRIM49P0CI25 452 aa9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 TRIM49CP0CI26 452 aa9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 CD58P19256 250 aa9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 ADORA2BP29275 332 aa9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 GRIA2P42262 883 aa9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 PXNP49023 591 aaPredicted RBP9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 MXI1P50539 228 aa9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 DGKEP52429 567 aa9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 MAP3K7CLP57077 242 aa9.37□□□□□ -0.91
CTNNA1-240ENST00000523912 SLC8A3P57103 927 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms