RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 MRPL58Q14197 206 aaKnown RBP9.81□□□□□ -0.84
SDCBP-212ENST00000523483 KCNT1Q5JUK3 1230 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 PPP1R2P3Q6NXS1 205 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 ADAT2Q7Z6V5 191 aaKnown RBP9.81□□□□□ -0.84
SDCBP-212ENST00000523483 CCDC50Q8IVM0 306 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 TDHQ8IZJ6 230 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 SPPL2BQ8TCT7 592 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 VCPIP1Q96JH7 1222 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 HSFY1Q96LI6 401 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 ZNF512Q96ME7 567 aaPredicted RBP9.81□□□□□ -0.84
SDCBP-212ENST00000523483 SLC4A5Q9BY07 1137 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 NACA2Q9H009 215 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 IGFLR1Q9H665 355 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 WDR35Q9P2L0 1181 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 PRRC2BQ5JSZ5 2229 aaKnown RBP9.81□□□□□ -0.84
SDCBP-212ENST00000523483 VWA8A3KMH1 1905 aa9.81□□□□□ -0.84
SDCBP-212ENST00000523483 KIF2AO00139 706 aaPredicted RBP9.8□□□□□ -0.84
SDCBP-212ENST00000523483 SEC24AO95486 1093 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 CTSAP10619 480 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 USP46P62068 366 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 RPS6KA1Q15418 735 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 CFAP221Q4G0U5 840 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 PLEKHA7Q6IQ23 1121 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 TMEM110Q86TL2 294 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 DEFB106AQ8N104 65 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.8□□□□□ -0.84
SDCBP-212ENST00000523483 SPPL3Q8TCT6 385 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 FBXO32Q969P5 355 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 NCANO14594 1321 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 ZNF185O15231 689 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 RNF8O76064 485 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 ADH1AP07327 375 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 MARCKSL1P49006 195 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 OGDHQ02218 1023 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 PLD1Q13393 1074 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 ZNF268Q14587 947 aaPredicted RBP9.8□□□□□ -0.84
SDCBP-212ENST00000523483 SLC8B1Q6J4K2 584 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 OLFML1Q6UWY5 402 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 SYCE1Q8N0S2 351 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 SPATA18Q8TC71 538 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 RNF34Q969K3 372 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 PKMYT1Q99640 499 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 HERC2P3Q9BVR0 1158 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 ZBP1Q9H171 429 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 AVENQ9NQS1 362 aaPredicted RBP9.8□□□□□ -0.84
SDCBP-212ENST00000523483 SMARCAL1Q9NZC9 954 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 NAALADL1Q9UQQ1 740 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 LTBP2Q14767 1821 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 TGM5O43548 720 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 LINC00271P0C7V0 271 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 TCF4P15884 667 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 DESP17661 470 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 ATXN1P54253 815 aaKnown RBP9.8□□□□□ -0.84
SDCBP-212ENST00000523483 YWHAZP63104 245 aaKnown RBP9.8□□□□□ -0.84
SDCBP-212ENST00000523483 MRPS5P82675 430 aaKnown RBP9.8□□□□□ -0.84
SDCBP-212ENST00000523483 RBM10P98175 930 aaKnown RBP9.8□□□□□ -0.84
SDCBP-212ENST00000523483 TWF1Q12792 350 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 RAB6CQ53S08 254 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 RASIP1Q5U651 963 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 VSTM1Q6UX27 236 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 NUP93Q8N1F7 819 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 FUBP3Q96I24 572 aaKnown RBP eCLIP9.8□□□□□ -0.843e-11■■■■■ 48.5
SDCBP-212ENST00000523483 APOL5Q9BWW9 433 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 EMILIN2Q9BXX0 1053 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 RAB6CQ9H0N0 254 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 JRKLQ9Y4A0 524 aa9.8□□□□□ -0.84
SDCBP-212ENST00000523483 SIGLEC16A6NMB1 481 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 TRIM66O15016 1216 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 ATF2P15336 505 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 TFE3P19532 575 aaPredicted RBP9.79□□□□□ -0.84
SDCBP-212ENST00000523483 GPD1P21695 349 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 CCDC181Q5TID7 509 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 BTBD8Q5XKL5 378 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 CC2D1AQ6P1N0 951 aaPredicted RBP9.79□□□□□ -0.84
SDCBP-212ENST00000523483 MIB1Q86YT6 1006 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 SP7Q8TDD2 431 aaPredicted RBP9.79□□□□□ -0.84
SDCBP-212ENST00000523483 KRT35Q92764 455 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 EHD2Q9NZN4 543 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 IP6K2Q9UHH9 426 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 RWDD3Q9Y3V2 267 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 PCDHA11Q9Y5I1 949 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 BACE2Q9Y5Z0 518 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 A0A0A6YYK5 440 aaPredicted RBP9.79□□□□□ -0.84
SDCBP-212ENST00000523483 TMEM191CA6NGB0 347 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 PI4K2BG5E9Z4 385 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 GLUD1P00367 558 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 TUFMP49411 452 aaKnown RBP9.79□□□□□ -0.84
SDCBP-212ENST00000523483 SULT1E1P49888 294 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 RPL10AP62906 217 aaKnown RBP9.79□□□□□ -0.84
SDCBP-212ENST00000523483 PITX1P78337 314 aaPredicted RBP9.79□□□□□ -0.84
SDCBP-212ENST00000523483 TAF10Q12962 218 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 VEPH1Q14D04 833 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 ATP13A4Q4VNC1 1196 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 SYPL2Q5VXT5 272 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 BSPRYQ5W0U4 402 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 FAM131BQ86XD5 332 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 MICALL1Q8N3F8 863 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 FAM172AQ8WUF8 416 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 HSPH1Q92598 858 aa9.79□□□□□ -0.84
SDCBP-212ENST00000523483 AFF4Q9UHB7 1163 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms