RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 NMD3Q96D46 503 aaKnown RBP11.77□□□□□ -0.53
LAMA4-219ENST00000522006 KCTD14Q9BQ13 255 aaPredicted RBP11.77□□□□□ -0.53
LAMA4-219ENST00000522006 TCF7P36402 384 aaPredicted RBP11.76□□□□□ -0.53
LAMA4-219ENST00000522006 RFX3P48380 749 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.76□□□□□ -0.53
LAMA4-219ENST00000522006 DGKDQ16760 1214 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 C2CD6Q53TS8 623 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 SH3GL1Q99961 368 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 CDC42EP4Q9H3Q1 356 aaKnown RBP11.76□□□□□ -0.53
LAMA4-219ENST00000522006 GPRC5DQ9NZD1 345 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 TMCC3Q9ULS5 477 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 DUSP10Q9Y6W6 482 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.76□□□□□ -0.53
LAMA4-219ENST00000522006 A0A0G2JLW4 131 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 E7ENQ6 273 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 HERVK_113P62684 666 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 OTUD4Q01804 1114 aaKnown RBP11.76□□□□□ -0.53
LAMA4-219ENST00000522006 PRKCQQ04759 706 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 ZNF177Q13360 481 aaPredicted RBP11.76□□□□□ -0.53
LAMA4-219ENST00000522006 PDK2Q15119 407 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 ATP6AP1LQ52LC2 224 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 PLEKHA7Q6IQ23 1121 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 WDR93Q6P2C0 686 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 STRA8Q7Z7C7 330 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 KAT2BQ92831 832 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 KLK14Q9P0G3 267 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 NDUFA13Q9P0J0 144 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 FOXN3O00409 490 aaPredicted RBP11.76□□□□□ -0.53
LAMA4-219ENST00000522006 CD44P16070 742 aaKnown RBP11.76□□□□□ -0.53
LAMA4-219ENST00000522006 RAP1GAPP47736 663 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 ANXA11P50995 505 aaKnown RBP11.76□□□□□ -0.53
LAMA4-219ENST00000522006 GRB10Q13322 594 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 CYP4Z1Q86W10 505 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 OOSP2Q86WS3 158 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 CCNJLQ8IV13 435 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 KCTD17Q8N5Z5 321 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 BHMTQ93088 406 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 DEPDC7Q96QD5 511 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 FUT8Q9BYC5 575 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 GEMIN8Q9NWZ8 242 aaKnown RBP11.76□□□□□ -0.53
LAMA4-219ENST00000522006 TRIM24O15164 1050 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 ATP9AO75110 1047 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 ATP6V1G2O95670 118 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 EIF2S1P05198 315 aaKnown RBP11.76□□□□□ -0.53
LAMA4-219ENST00000522006 MUTP22033 750 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 TIGD7Q6NT04 549 aaPredicted RBP11.76□□□□□ -0.53
LAMA4-219ENST00000522006 MYO1HQ8N1T3 1032 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 FLCNQ8NFG4 579 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 ATP8B4Q8TF62 1192 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 SLITRK1Q96PX8 696 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 PAPOLBQ9NRJ5 636 aaKnown RBP11.76□□□□□ -0.53
LAMA4-219ENST00000522006 GPATCH2LQ9NWQ4 482 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 PXDNLA1KZ92 1463 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 CLTCL1P53675 1640 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 A0A087X0T9 212 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 ENTPD3O75355 529 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 FAM228BP0C875 321 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 POU1F1P28069 291 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 TRAF2Q12933 501 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 SNAPC2Q13487 334 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 CRYMQ14894 314 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 SDE2Q6IQ49 451 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 FAM117BQ6P1L5 589 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 TRIM48Q8IWZ4 208 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 ASZ1Q8WWH4 475 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 RSPH1Q8WYR4 309 aa11.76□□□□□ -0.53
LAMA4-219ENST00000522006 PPP1R10Q96QC0 940 aaKnown RBP11.76□□□□□ -0.53
LAMA4-219ENST00000522006 TNS3Q68CZ2 1445 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 MSH4O15457 936 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 PCNAP12004 261 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 PBLDP30039 288 aaPredicted RBP11.75□□□□□ -0.53
LAMA4-219ENST00000522006 NCF4Q15080 339 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 MFSD4BQ5TF39 518 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 FAM136AQ96C01 138 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 TAAR1Q96RJ0 339 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 MAP3K14Q99558 947 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 MTMR12Q9C0I1 747 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 RAD18Q9NS91 495 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 INTS13Q9NVM9 706 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 ABCC3O15438 1527 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 KANSL1LA0AUZ9 987 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 TK2O00142 265 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 HSMCR30P0CW71 290 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 GPC1P35052 558 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 NUP62P37198 522 aaPredicted RBP11.75□□□□□ -0.53
LAMA4-219ENST00000522006 ACTRT1Q8TDG2 376 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 USP13Q92995 863 aaPredicted RBP11.75□□□□□ -0.53
LAMA4-219ENST00000522006 PIF1Q9H611 641 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 LRRC40Q9H9A6 602 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 ZNRF3Q9ULT6 936 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 HPS5Q9UPZ3 1129 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 CAPN6Q9Y6Q1 641 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 CLPTM1O96005 669 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 SLC11A2P49281 568 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 TMEM79Q9BSE2 394 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 FICDQ9BVA6 458 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 DCLRE1BQ9H816 532 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 F5H5T6 163 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 TM9SF1O15321 606 aa11.75□□□□□ -0.53
LAMA4-219ENST00000522006 AP1G2O75843 785 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms