RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 OTUD4Q01804 1114 aaKnown RBP19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 PLCB3Q01970 1234 aa19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 BOLA3Q53S33 107 aa19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 IZUMO3Q5VZ72 239 aa19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 DSTYKQ6XUX3 929 aa19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 PRUNE1Q86TP1 453 aa19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 CCDC25Q86WR0 208 aa19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 C3orf58Q8NDZ4 430 aa19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 ACTL9Q8TC94 416 aa19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 PGBD4Q96DM1 585 aa19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 ADAM2Q99965 735 aa19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 AAASQ9NRG9 546 aa19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 SQORQ9Y6N5 450 aa19.33■□□□□ 0.68
TRAPPC9-210ENST00000521667 CASTOR2A6NHX0 329 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 CAND2O75155 1236 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 GNRH1P01148 92 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 PTPN9P43378 593 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 ARSEP51690 589 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 UPP1Q16831 310 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 CCDC142Q17RM4 750 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 SCYL2Q6P3W7 929 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 PIGZQ86VD9 579 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 TEKT4Q8WW24 435 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 TBCBQ99426 244 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 CENPHQ9H3R5 247 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 SAGE1Q9NXZ1 904 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 APOC4-APOC2K7ER74 178 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 APOC2P02655 101 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 SKIP12755 728 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 NPR3P17342 541 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 CHKAP35790 457 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 SLC29A2Q14542 456 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 P3H1Q32P28 736 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 MDH1BQ5I0G3 518 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 KIAA0319Q5VV43 1072 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 PAQR9Q6ZVX9 377 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 TRMT10CQ7L0Y3 403 aaKnown RBP19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 GLIS1Q8NBF1 620 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 TMEM121Q9BTD3 319 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 UBN1Q9NPG3 1134 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 SAE1Q9UBE0 346 aaPredicted RBP19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 PTCH2Q9Y6C5 1203 aa19.32■□□□□ 0.68
TRAPPC9-210ENST00000521667 CLDN5O00501 218 aa19.31■□□□□ 0.68
TRAPPC9-210ENST00000521667 RIPK2O43353 540 aa19.31■□□□□ 0.68
TRAPPC9-210ENST00000521667 DPYSL3Q14195 570 aa19.31■□□□□ 0.68
TRAPPC9-210ENST00000521667 PDK2Q15119 407 aa19.31■□□□□ 0.68
TRAPPC9-210ENST00000521667 KRT71Q3SY84 523 aa19.31■□□□□ 0.68
TRAPPC9-210ENST00000521667 MAP7D3Q8IWC1 876 aa19.31■□□□□ 0.68
TRAPPC9-210ENST00000521667 SYT15Q9BQS2 421 aa19.31■□□□□ 0.68
TRAPPC9-210ENST00000521667 PAAF1Q9BRP4 392 aa19.31■□□□□ 0.68
TRAPPC9-210ENST00000521667 TSEN34Q9BSV6 310 aaKnown RBP19.31■□□□□ 0.68
TRAPPC9-210ENST00000521667 C11orf84Q9BUA3 381 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC9-210ENST00000521667 MAK16Q9BXY0 300 aaKnown RBP19.31■□□□□ 0.68
TRAPPC9-210ENST00000521667 TRIM17Q9Y577 477 aa19.31■□□□□ 0.68
TRAPPC9-210ENST00000521667 SGK1O00141 431 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 POMCP01189 267 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 SHBGP04278 402 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 ZSCAN5DPP0CG00 497 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 CAPN2P17655 700 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 IBSPP21815 317 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 HDAC4P56524 1084 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 KRT81Q14533 505 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 EFHC1Q5JVL4 640 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 AGBL2Q5U5Z8 902 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 HIBCHQ6NVY1 386 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 MED10Q9BTT4 135 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 PCDH9Q9HC56 1237 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 CRTAC1Q9NQ79 661 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 TIMM13Q9Y5L4 95 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 DNALI1O14645 258 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 CKBP12277 381 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 GRIK3Q13003 919 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 MMRN1Q13201 1228 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 TFDP2Q14188 446 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 DNAJC21Q5F1R6 531 aaKnown RBP19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 CLEC20AQ6ZU45 233 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 HOOK3Q86VS8 718 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 KCTD13Q8WZ19 329 aa19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 CENPIQ92674 756 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 DDX23Q9BUQ8 820 aaKnown RBP19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 CDC42EP4Q9H3Q1 356 aaKnown RBP19.3■□□□□ 0.68
TRAPPC9-210ENST00000521667 MDM4O15151 490 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 BEST1O76090 585 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 FAM200BP0CF97 657 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 ETS1P14921 441 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 TFE3P19532 575 aaPredicted RBP19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 NR1D1P20393 614 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 SKOR1P84550 965 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 ADIGQ0VDE8 80 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 GPS1Q13098 491 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 TIGD5Q53EQ6 642 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 UBAP2Q5T6F2 1119 aaKnown RBP19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 EMC10Q5UCC4 262 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 LHX8Q68G74 356 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 KDM7AQ6ZMT4 941 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 ECHDC2Q86YB7 292 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 SH3TC2Q8TF17 1288 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 SNRNP25Q9BV90 132 aaKnown RBP19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 TRPV6Q9H1D0 765 aa19.29■□□□□ 0.68
TRAPPC9-210ENST00000521667 ADAM7Q9H2U9 754 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms