RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 HS2ST1Q7LGA3 356 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 TRMT11Q7Z4G4 463 aaKnown RBP17.48■□□□□ 0.39
TRAM1-204ENST00000521049 RABEPKQ7Z6M1 372 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 WDR49Q8IV35 697 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 HDDC3Q8N4P3 179 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 DUSP9Q99956 384 aaKnown RBP17.48■□□□□ 0.39
TRAM1-204ENST00000521049 SNX25Q9H3E2 840 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 KIAA1586Q9HCI6 787 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 PANK4Q9NVE7 773 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 FBXO2Q9UK22 296 aaPredicted RBP17.48■□□□□ 0.39
TRAM1-204ENST00000521049 THADAQ6YHU6 1953 aa17.48■□□□□ 0.39
TRAM1-204ENST00000521049 PTPRJQ12913 1337 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 ATRXP46100 2492 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 NUP205Q92621 2012 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 SPAARA0A1B0GVQ0 90 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 PRPF6O94906 941 aaKnown RBP17.47■□□□□ 0.39
TRAM1-204ENST00000521049 CENPBP07199 599 aaPredicted RBP17.47■□□□□ 0.39
TRAM1-204ENST00000521049 SERPINF2P08697 491 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 PTPN1P18031 435 aaKnown RBP17.47■□□□□ 0.39
TRAM1-204ENST00000521049 RING1Q06587 406 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 HNRNPDQ14103 355 aaKnown RBP17.47■□□□□ 0.39
TRAM1-204ENST00000521049 MDH1BQ5I0G3 518 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 LY6G5CQ5SRR4 150 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 CCDC73Q6ZRK6 1079 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 TRAPPC11Q7Z392 1133 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 ETFBKMTQ8IXQ9 262 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 PDZD8Q8NEN9 1154 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 OVCA2Q8WZ82 227 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 MRPL45Q9BRJ2 306 aaKnown RBP17.47■□□□□ 0.39
TRAM1-204ENST00000521049 FGFBP2Q9BYJ0 223 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 ELOVL4Q9GZR5 314 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 CAPN10Q9HC96 672 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 KLK13Q9UKR3 277 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 CLIC4Q9Y696 253 aa17.47■□□□□ 0.39
TRAM1-204ENST00000521049 SCAMP3O14828 347 aaKnown RBP17.46■□□□□ 0.39
TRAM1-204ENST00000521049 OPHN1O60890 802 aa17.46■□□□□ 0.39
TRAM1-204ENST00000521049 RTN3O95197 1032 aaPredicted RBP17.46■□□□□ 0.39
TRAM1-204ENST00000521049 CST3P01034 146 aaPredicted RBP17.46■□□□□ 0.39
TRAM1-204ENST00000521049 CFIP05156 583 aa17.46■□□□□ 0.39
TRAM1-204ENST00000521049 YWHAQP27348 245 aa17.46■□□□□ 0.39
TRAM1-204ENST00000521049 KDSRQ06136 332 aa17.46■□□□□ 0.39
TRAM1-204ENST00000521049 ACAP1Q15027 740 aa17.46■□□□□ 0.39
TRAM1-204ENST00000521049 SNX30Q5VWJ9 437 aa17.46■□□□□ 0.39
TRAM1-204ENST00000521049 BTBD8Q5XKL5 378 aa17.46■□□□□ 0.39
TRAM1-204ENST00000521049 CBWD2Q8IUF1 395 aa17.46■□□□□ 0.39
TRAM1-204ENST00000521049 NUP93Q8N1F7 819 aa17.46■□□□□ 0.39
TRAM1-204ENST00000521049 OR6B3Q8NGW1 331 aa17.46■□□□□ 0.39
TRAM1-204ENST00000521049 DEC1Q9P2X7 70 aa17.46■□□□□ 0.39
TRAM1-204ENST00000521049 STARD13Q9Y3M8 1113 aa17.46■□□□□ 0.39
TRAM1-204ENST00000521049 NME7Q9Y5B8 376 aa17.46■□□□□ 0.39
TRAM1-204ENST00000521049 ASPMQ8IZT6 3477 aa17.46■□□□□ 0.39
TRAM1-204ENST00000521049 SPEGQ15772 3267 aa17.45■□□□□ 0.38
TRAM1-204ENST00000521049 ANAPC1Q9H1A4 1944 aa17.45■□□□□ 0.38
TRAM1-204ENST00000521049 KIAA1549LQ6ZVL6 1849 aa17.45■□□□□ 0.38
TRAM1-204ENST00000521049 HOXC11O43248 304 aaPredicted RBP17.45■□□□□ 0.38
TRAM1-204ENST00000521049 CD2BP2O95400 341 aaKnown RBP17.45■□□□□ 0.38
TRAM1-204ENST00000521049 GABRG2P18507 467 aa17.45■□□□□ 0.38
TRAM1-204ENST00000521049 CACNA2D1P54289 1103 aa17.45■□□□□ 0.38
TRAM1-204ENST00000521049 RPL6Q02878 288 aaKnown RBP17.45■□□□□ 0.38
TRAM1-204ENST00000521049 ZNF33AQ06730 810 aa17.45■□□□□ 0.38
TRAM1-204ENST00000521049 C8orf34Q49A92 452 aa17.45■□□□□ 0.38
TRAM1-204ENST00000521049 HECTD3Q5T447 861 aa17.45■□□□□ 0.38
TRAM1-204ENST00000521049 STXBP4Q6ZWJ1 553 aa17.45■□□□□ 0.38
TRAM1-204ENST00000521049 CCDC65Q8IXS2 484 aa17.45■□□□□ 0.38
TRAM1-204ENST00000521049 ZNF513Q8N8E2 541 aaPredicted RBP17.45■□□□□ 0.38
TRAM1-204ENST00000521049 ZFRQ96KR1 1074 aaKnown RBP17.45■□□□□ 0.38
TRAM1-204ENST00000521049 CLIC6Q96NY7 704 aa17.45■□□□□ 0.38
TRAM1-204ENST00000521049 GTPBP2Q9BX10 602 aaKnown RBP17.45■□□□□ 0.38
TRAM1-204ENST00000521049 ZDHHC4Q9NPG8 344 aa17.45■□□□□ 0.38
TRAM1-204ENST00000521049 TMEM30AQ9NV96 361 aa17.45■□□□□ 0.38
TRAM1-204ENST00000521049 CHORDC1Q9UHD1 332 aaPredicted RBP17.45■□□□□ 0.38
TRAM1-204ENST00000521049 LHX6Q9UPM6 363 aa17.45■□□□□ 0.38
TRAM1-204ENST00000521049 ATXN2Q99700 1313 aaKnown RBP17.45■□□□□ 0.38
TRAM1-204ENST00000521049 MYO16Q9Y6X6 1858 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 ARHGAP33O14559 1287 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 ZBTB24O43167 697 aaPredicted RBP17.44■□□□□ 0.38
TRAM1-204ENST00000521049 COCHO43405 550 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 ZNF217O75362 1048 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 TULP3O75386 442 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 NTSR1P30989 418 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 ZNF423Q2M1K9 1284 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 NAT16Q8N8M0 369 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 FBXO32Q969P5 355 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 B3GNT5Q9BYG0 378 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 PANK2Q9BZ23 570 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 ZNF518BQ9C0D4 1074 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 SPHK2Q9NRA0 654 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 DNAAF2Q9NVR5 837 aaKnown RBP17.44■□□□□ 0.38
TRAM1-204ENST00000521049 IL37Q9NZH6 218 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 HSPBP1Q9NZL4 362 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 SH3BP1Q9Y3L3 701 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 IGF2RP11717 2491 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 ASCC3Q8N3C0 2202 aaKnown RBP17.44■□□□□ 0.38
TRAM1-204ENST00000521049 BAHCC1Q9P281 2608 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 PCNX2A6NKB5 2137 aa17.44■□□□□ 0.38
TRAM1-204ENST00000521049 A8MXQ7 604 aa17.43■□□□□ 0.38
TRAM1-204ENST00000521049 STAU1O95793 577 aaKnown RBP17.43■□□□□ 0.38
TRAM1-204ENST00000521049 CAPNS1P04632 268 aa17.43■□□□□ 0.38
TRAM1-204ENST00000521049 SYPP08247 313 aa17.43■□□□□ 0.38
TRAM1-204ENST00000521049 CD59P13987 128 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms