RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 FILIP1Q7Z7B0 1213 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 FMR1NBQ8N0W7 255 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-209ENST00000520630 C1orf216Q8TAB5 229 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 C2orf15Q8WU43 125 aaKnown RBP8.57□□□□□ -1.04
CSMD1-209ENST00000520630 ERLEC1Q96DZ1 483 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 PNKPQ96T60 521 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 ACOX2Q99424 681 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 TRPC7Q9HCX4 862 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 BCCIPQ9P287 314 aaKnown RBP eCLIP8.57□□□□□ -1.04
CSMD1-209ENST00000520630 DNMT3LQ9UJW3 386 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 ARHGAP26Q9UNA1 814 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 SCN8AQ9UQD0 1980 aa8.57□□□□□ -1.04
CSMD1-209ENST00000520630 TRAV19A0A0A6YYK7 116 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 VWA3AA6NCI4 1184 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 PLK4O00444 970 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 CYB561D2O14569 222 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 ARHGAP6O43182 974 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 NFATC1O95644 943 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 CKMP06732 381 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 CLTAP09496 248 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 PFKFB1P16118 471 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 LONP1P36776 959 aaKnown RBP8.56□□□□□ -1.04
CSMD1-209ENST00000520630 WASP42768 502 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 NDUFA8P51970 172 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 USP46P62068 366 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 CFHR1Q03591 330 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 KDSRQ06136 332 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 NR1H3Q13133 447 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 HSF5Q4G112 596 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-209ENST00000520630 EOGTQ5NDL2 527 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 RINT1Q6NUQ1 792 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 CAVIN1Q6NZI2 390 aaKnown RBP8.56□□□□□ -1.04
CSMD1-209ENST00000520630 SLC36A4Q6YBV0 504 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 ETFBKMTQ8IXQ9 262 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 PGBD3Q8N328 593 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 SETD7Q8WTS6 366 aaKnown RBP8.56□□□□□ -1.04
CSMD1-209ENST00000520630 DNASE2BQ8WZ79 361 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 WBP2Q969T9 261 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 EXOC4Q96A65 974 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 EPSTI1Q96J88 318 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 CCSER1Q9C0I3 900 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 PRDM16Q9HAZ2 1276 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 CYP8B1Q9UNU6 501 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 KIAA1024Q9UPX6 916 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 PCDHB5Q9Y5E4 795 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 RP1P56715 2156 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 CACNA1DQ01668 2161 aa8.56□□□□□ -1.04
CSMD1-209ENST00000520630 A0A087X0B3 334 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 GOLGA8CPA6NN73 597 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 KCNJ18B7U540 433 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 CLDN3O15551 220 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 CILPO75339 1184 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 OLFM2O95897 454 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 APODP05090 189 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 ZNF883P0CG24 379 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 HDCP19113 662 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 MUTP22033 750 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 CDC25AP30304 524 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 EIF2DP41214 584 aaKnown RBP8.55□□□□□ -1.04
CSMD1-209ENST00000520630 TNFRSF4P43489 277 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 FXR2P51116 673 aaKnown RBP eCLIP8.55□□□□□ -1.04
CSMD1-209ENST00000520630 WNT7BP56706 349 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 BYSLQ13895 437 aaKnown RBP8.55□□□□□ -1.04
CSMD1-209ENST00000520630 TAF12Q16514 161 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 LMBRD2Q68DH5 695 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-209ENST00000520630 ZPBP2Q6X784 338 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 DTHD1Q6ZMT9 781 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 CCDC73Q6ZRK6 1079 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 RABEPKQ7Z6M1 372 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 OSTM1Q86WC4 334 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 PDCD7Q8N8D1 485 aaKnown RBP8.55□□□□□ -1.04
CSMD1-209ENST00000520630 IGSF22Q8N9C0 903 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 CCDC26Q8TAB7 109 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 SPATA18Q8TC71 538 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 P2RY11Q96G91 374 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 FCRL3Q96P31 734 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-209ENST00000520630 PNMA5Q96PV4 448 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 PYM1Q9BRP8 204 aaKnown RBP8.55□□□□□ -1.04
CSMD1-209ENST00000520630 MMTAG2Q9BU76 263 aaKnown RBP8.55□□□□□ -1.04
CSMD1-209ENST00000520630 TRIM9Q9C026 710 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 CLSTN2Q9H4D0 955 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 GAREM1Q9H706 876 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 ARHGEF4Q9NR80 690 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 TM7SF3Q9NS93 570 aa8.55□□□□□ -1.04
CSMD1-209ENST00000520630 DDX19AQ9NUU7 478 aaKnown RBP8.55□□□□□ -1.04
CSMD1-209ENST00000520630 CPSF3Q9UKF6 684 aaKnown RBP8.55□□□□□ -1.04
CSMD1-209ENST00000520630 PP2D1A8MPX8 630 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 ZNF202O95125 648 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 ACAT1P24752 427 aaKnown RBP8.54□□□□□ -1.04
CSMD1-209ENST00000520630 GRIA2P42262 883 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 SLC7A9P82251 487 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 PPP2R3AQ06190 1150 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 SMARCB1Q12824 385 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 PDIA5Q14554 519 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 HLA-BQ31612 363 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 ZSCAN23Q3MJ62 389 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 CCDC183Q5T5S1 534 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 EGFLAMQ63HQ2 1017 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 DHRS13Q6UX07 377 aa8.54□□□□□ -1.04
CSMD1-209ENST00000520630 RBM43Q6ZSC3 357 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms