RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 HYIQ5T013 277 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 VPS53Q5VIR6 699 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 CPOQ8IVL8 374 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 ABRAQ8N0Z2 381 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 SUN3Q8TAQ9 357 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 CPT1CQ8TCG5 803 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 Q8TCH9 128 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 AFG1LQ8WV93 481 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 RILPL2Q969X0 211 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 FAM136AQ96C01 138 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 TTPALQ9BTX7 342 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 GALNT9Q9HCQ5 603 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 G6PC2Q9NQR9 355 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 AURKAIP1Q9NWT8 199 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 GGA3Q9NZ52 723 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 NDUFAF4Q9P032 175 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 FBXO9Q9UK97 447 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 SORCS3Q9UPU3 1222 aa6.09□□□□□ -1.43
HMGB1P46-201ENST00000520062 FAM90A18PA6NE21 464 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 FAM90A16PA6NEW6 464 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 FAM90A9PA6NNJ1 464 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 FAM90A5PA8MXJ8 464 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 AHRRA9YTQ3 701 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 RNASET2O00584 256 aaKnown RBP6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 CBFA2T3O75081 653 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 ZNF623O75123 536 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 RHOBTB3O94955 611 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 SCAF4O95104 1147 aaKnown RBP6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 POLBP06746 335 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 FAM90A15PP0C7V4 464 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 FAM90A14PP0C7W9 464 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 ZSCAN22P10073 491 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 KLRK1P26718 216 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 VAV2P52735 878 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 MPP1Q00013 466 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 G3BP1Q13283 466 aaKnown RBP eCLIP6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 CRHR2Q13324 411 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 GRM4Q14833 912 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 CD300EQ496F6 205 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 UBXN11Q5T124 520 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 RSRC2Q7L4I2 434 aaKnown RBP6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 LIMS2Q7Z4I7 341 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 MAATS1Q7Z4T9 603 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 ANKS1BQ7Z6G8 1248 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 SIAH1Q8IUQ4 282 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 ESX1Q8N693 406 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 TMEM171Q8WVE6 324 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 OSCP1Q8WVF1 389 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 CPT1BQ92523 772 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 FUBP1Q96AE4 644 aaKnown RBP6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 TMEM125Q96AQ2 219 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 VN1R3Q9BXE9 311 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 UNKLQ9H9P5 680 aaKnown RBP6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 UBN1Q9NPG3 1134 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 INTS13Q9NVM9 706 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 IFT80Q9P2H3 777 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 PI4KBQ9UBF8 816 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 SERTAD3Q9UJW9 196 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 USP22Q9UPT9 525 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 JAG2Q9Y219 1238 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 NOX1Q9Y5S8 564 aa6.08□□□□□ -1.44
HMGB1P46-201ENST00000520062 CCDC196A0A1B0GTZ2 297 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 TAF5LO75529 589 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 C8AP07357 584 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 CD19P15391 556 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 TNFAIP3P21580 790 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 BDNFP23560 247 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 CNTFP26441 200 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 AKT1P31749 480 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 HTR7P34969 479 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 MTHFSP49914 203 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 UBE3AQ05086 875 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 TRPC3Q13507 836 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 FHL3Q13643 280 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 RRP1BQ14684 758 aaKnown RBP6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 ACOX1Q15067 660 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 GEN1Q17RS7 908 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 BTBD16Q32M84 506 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 RABL3Q5HYI8 236 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 IZUMO1Q8IYV9 350 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 ATRIPQ8WXE1 791 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 ATG4AQ8WYN0 398 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 NACC2Q96BF6 587 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 MAELQ96JY0 434 aaKnown RBP6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 TEPSINQ96N21 525 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 SLC26A6Q9BXS9 759 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 TEX101Q9BY14 249 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 AMBRA1Q9C0C7 1298 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 XYLT2Q9H1B5 865 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 VPS16Q9H269 839 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 ELAC1Q9H777 363 aaKnown RBP6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 FSCN3Q9NQT6 498 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 RIMKLBQ9ULI2 386 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 CNTN6Q9UQ52 1028 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 SNX14Q9Y5W7 946 aa6.07□□□□□ -1.44
HMGB1P46-201ENST00000520062 GXYLT2A0PJZ3 443 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 BTBD11A6QL63 1104 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 TISP43B9A030 160 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 AGPSO00116 658 aa6.06□□□□□ -1.44
HMGB1P46-201ENST00000520062 MBD4O95243 580 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms