RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ZNF638Q14966 1978 aaKnown RBP9.9□□□□□ -0.83
HDAC3-215ENST00000519474 NUP210Q8TEM1 1887 aaPredicted RBP9.89□□□□□ -0.83
HDAC3-215ENST00000519474 ATP8B3O60423 1300 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 SLC16A3O15427 465 aaKnown RBP9.89□□□□□ -0.83
HDAC3-215ENST00000519474 COCHO43405 550 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 LILRB5O75023 590 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 CD58P19256 250 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 PPP1R2P41236 205 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 SLC5A3P53794 718 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 SATB1Q01826 763 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 USP4Q13107 963 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 ZNF394Q53GI3 561 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 TCERG1LQ5VWI1 586 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 KLHL10Q6JEL2 608 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 FSTL4Q6MZW2 842 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 CLEC20AQ6ZU45 233 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 SYNPOQ8N3V7 929 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 SPEM1Q8N4L4 309 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 SLC4A11Q8NBS3 891 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 CCDC150Q8NCX0 1101 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 TTC16Q8NEE8 873 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 LMO3Q8TAP4 145 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 NELFBQ8WX92 580 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 FBXO32Q969P5 355 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 WBP2Q969T9 261 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 CEP63Q96MT8 703 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 SLITRK1Q96PX8 696 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 MED15Q96RN5 788 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 DUSP16Q9BY84 665 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 NIF3L1Q9GZT8 377 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 METTL14Q9HCE5 456 aaKnown RBP9.89□□□□□ -0.83
HDAC3-215ENST00000519474 PRMT8Q9NR22 394 aaPredicted RBP9.89□□□□□ -0.83
HDAC3-215ENST00000519474 KRT82Q9NSB4 513 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 CISHQ9NSE2 258 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 ARMCX3Q9UH62 379 aaPredicted RBP9.89□□□□□ -0.83
HDAC3-215ENST00000519474 CPQQ9Y646 472 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 MIA3Q5JRA6 1907 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 OBSL1O75147 1896 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 WDFY4Q6ZS81 3184 aa9.89□□□□□ -0.83
HDAC3-215ENST00000519474 CACNA1HO95180 2353 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 K7ESF4 209 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 PSMA7O14818 248 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 PMM2O15305 246 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 TBX18O95935 607 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 EGFP01133 1207 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 LMNAP02545 664 aaKnown RBP9.88□□□□□ -0.83
HDAC3-215ENST00000519474 FAM200BP0CF97 657 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 IFNAR2P48551 515 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 MXI1P50539 228 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 PDE6CP51160 858 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 STX17P56962 302 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 UBE2HP62256 183 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 NR1H3Q13133 447 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 STIM1Q13586 685 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 LRRC32Q14392 662 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 CAMK4Q16566 473 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 GAB4Q2WGN9 574 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 HECTD3Q5T447 861 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 PKN3Q6P5Z2 889 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 RHBDF2Q6PJF5 856 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 FOXR2Q6PJQ5 311 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 Q6ZS52 159 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 GPRIN1Q7Z2K8 1008 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 KIAA1958Q8N8K9 716 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 PDZD8Q8NEN9 1154 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 EZH1Q92800 747 aaPredicted RBP9.88□□□□□ -0.83
HDAC3-215ENST00000519474 TMEM176AQ96HP8 235 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 ZFRQ96KR1 1074 aaKnown RBP9.88□□□□□ -0.83
HDAC3-215ENST00000519474 IER2Q9BTL4 223 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 SRRTQ9BXP5 876 aaKnown RBP9.88□□□□□ -0.83
HDAC3-215ENST00000519474 UBXN6Q9BZV1 441 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 CCSER2Q9H7U1 834 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 OSER1Q9NX31 292 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 ZSCAN32Q9NX65 697 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 SMPD4Q9NXE4 827 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 GMIPQ9P107 970 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 KIAA1468Q9P260 1216 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 SCML2Q9UQR0 700 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 USP3Q9Y6I4 520 aa9.88□□□□□ -0.83
HDAC3-215ENST00000519474 KIF26AQ9ULI4 1882 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-215ENST00000519474 ANTXRLA6NF34 631 aa9.87□□□□□ -0.83
HDAC3-215ENST00000519474 RNF225M0QZC1 329 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-215ENST00000519474 HRO43593 1189 aa9.87□□□□□ -0.83
HDAC3-215ENST00000519474 MBL2P11226 248 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-215ENST00000519474 ACO1P21399 889 aaKnown RBP9.87□□□□□ -0.83
HDAC3-215ENST00000519474 OPRD1P41143 372 aa9.87□□□□□ -0.83
HDAC3-215ENST00000519474 SLC6A11P48066 632 aa9.87□□□□□ -0.83
HDAC3-215ENST00000519474 FMO5P49326 533 aa9.87□□□□□ -0.83
HDAC3-215ENST00000519474 CCR3P51677 355 aa9.87□□□□□ -0.83
HDAC3-215ENST00000519474 KIF11P52732 1056 aa9.87□□□□□ -0.83
HDAC3-215ENST00000519474 AMPD2Q01433 879 aa9.87□□□□□ -0.83
HDAC3-215ENST00000519474 DMWDQ09019 674 aa9.87□□□□□ -0.83
HDAC3-215ENST00000519474 GRSF1Q12849 480 aaKnown RBP eCLIP9.87□□□□□ -0.83
HDAC3-215ENST00000519474 LRMPQ12912 555 aa9.87□□□□□ -0.83
HDAC3-215ENST00000519474 DHCR24Q15392 516 aa9.87□□□□□ -0.83
HDAC3-215ENST00000519474 DCAF17Q5H9S7 520 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-215ENST00000519474 ARHGAP17Q68EM7 881 aa9.87□□□□□ -0.83
HDAC3-215ENST00000519474 SCD5Q86SK9 330 aa9.87□□□□□ -0.83
HDAC3-215ENST00000519474 CPA6Q8N4T0 437 aa9.87□□□□□ -0.83
HDAC3-215ENST00000519474 TTC39CQ8N584 583 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms