RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 TPBGLP0DKB5 382 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 MYL2P10916 166 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 COL6A2P12110 1019 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 CCDC130P13994 396 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 CPA3P15088 417 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 PCSK2P16519 638 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 EIF2AK2P19525 551 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 GPD1P21695 349 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 KCNA3P22001 575 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 IL10P22301 178 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 MMP8P22894 467 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 RPS12P25398 132 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 DNAJB1P25685 340 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 TARSP26639 723 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 KLRC2P26717 231 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 RXRBP28702 533 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 PRDX6P30041 224 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ECHS1P30084 290 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 SSTR1P30872 391 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 TTKP33981 857 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 CRHR1P34998 444 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 PEX19P40855 299 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ELK3P41970 407 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 PHKA2P46019 1235 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 RPL5P46777 297 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 GCLCP48506 637 aaPredicted RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 SLC1A6P48664 564 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ACOT2P49753 483 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 PSMD7P51665 324 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 RAP1GDS1P52306 607 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ATN1P54259 1190 aaPredicted RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 CACNA2D1P54289 1103 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ALDH18A1P54886 795 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 AIF1P55008 147 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 CDH6P55285 790 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 KCNQ4P56696 695 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 NUP107P57740 925 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 SESN3P58005 492 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 SNAP25P60880 206 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ABCE1P61221 599 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 NCALDP61601 193 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 RPS6P62753 249 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 DYNLT1P63172 113 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 KCNJ2P63252 427 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 UBXN2AP68543 259 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 DLG4P78352 724 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 CLDN10P78369 228 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 TFAMQ00059 246 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 OTUD4Q01804 1114 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 OCRLQ01968 901 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ROR2Q01974 943 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 PPARDQ03181 441 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 POU5F1BQ06416 359 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 WASHC5Q12768 1159 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 SF3A3Q12874 501 aaKnown RBP eCLIP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ZBTB17Q13105 803 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 PPIL2Q13356 520 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 THOC5Q13769 683 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 BAATQ14032 418 aaPredicted RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 RCN2Q14257 317 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 PDK1Q15118 436 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 RPS6KA2Q15349 733 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 PCBP1Q15365 356 aaKnown RBP eCLIP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ZYXQ15942 572 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 CNGA3Q16281 694 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 PKN2Q16513 984 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ZNF699Q32M78 642 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 WDR72Q3MJ13 1102 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 KBTBD12Q3ZCT8 623 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ZACNQ401N2 412 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 AASDHQ4L235 1098 aaPredicted RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 EFHC2Q5JST6 749 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ZNF484Q5JVG2 852 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 DACT2Q5SW24 774 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 RARS2Q5T160 578 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 GJC2Q5T442 439 aaPredicted RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ANGEL2Q5VTE6 544 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 HEATR6Q6AI08 1181 aaKnown RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 SCARA3Q6AZY7 606 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ITPRIPL1Q6GPH6 555 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ZNF280DQ6N043 979 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 GPAT2Q6NUI2 795 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 DPY19L2P1Q6NXN4 242 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 TTC27Q6P3X3 843 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 KLC3Q6P597 504 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 TLDC1Q6P9B6 456 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 RSBN1LQ6PCB5 846 aaPredicted RBP2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 RHBDF2Q6PJF5 856 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 VSTM1Q6UX27 236 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 TIFABQ6ZNK6 161 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 LRRC74BQ6ZQY2 392 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 CAPN12Q6ZSI9 719 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 BBS12Q6ZW61 710 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 RAPH1Q70E73 1250 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ILDR2Q71H61 639 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 ARMCX6Q7L4S7 300 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 OTOAQ7RTW8 1153 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 PLPPR4Q7Z2D5 763 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 KRT27Q7Z3Y8 459 aa2.14□□□□□ -2.07
RNU1-40P-201ENST00000516816 RAB44Q7Z6P3 723 aaPredicted RBP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms