RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 FOXD2O60548 495 aaPredicted RBP5.07□□□□□ -1.6
NIPBL-207ENST00000513819 RHOP08100 348 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 SLC5A2P31639 672 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 MAGEA10P43363 369 aaPredicted RBP5.07□□□□□ -1.6
NIPBL-207ENST00000513819 CCT5P48643 541 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 GATMP50440 423 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 SCAPQ12770 1279 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 FHL3Q13643 280 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 CLEC9AQ6UXN8 241 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 RNF207Q6ZRF8 634 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 RASGRP3Q8IV61 690 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 IZUMO1Q8IYV9 350 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 GALNT15Q8N3T1 639 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 C11orf44Q8N8P7 122 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 TOR1AIP2Q8NFQ8 470 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 MYCBPAPQ8TBZ2 947 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 ASB10Q8WXI3 467 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 EID2BQ96D98 161 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 ZNF668Q96K58 619 aaPredicted RBP5.07□□□□□ -1.6
NIPBL-207ENST00000513819 LPAR3Q9UBY5 353 aa5.07□□□□□ -1.6
NIPBL-207ENST00000513819 TESQ9UGI8 421 aaKnown RBP5.07□□□□□ -1.6
NIPBL-207ENST00000513819 OR2W5A6NFC9 320 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 ZAR1LA6NP61 321 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 J3KTA2 159 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 ZSCAN9O15535 394 aaPredicted RBP5.06□□□□□ -1.6
NIPBL-207ENST00000513819 SNX2O60749 519 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 GLP2RO95838 553 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 VIPP01282 170 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 ITGA2BP08514 1039 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 ITGAMP11215 1152 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 KLRK1P26718 216 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 EPHA3P29320 983 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 CLCN2P51788 898 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 ATXN1P54253 815 aaKnown RBP5.06□□□□□ -1.6
NIPBL-207ENST00000513819 PNLIPRP1P54315 467 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 ALDH18A1P54886 795 aaKnown RBP5.06□□□□□ -1.6
NIPBL-207ENST00000513819 ADAM17P78536 824 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 TIAL1Q01085 375 aaKnown RBP eCLIP5.06□□□□□ -1.6
NIPBL-207ENST00000513819 PPFIA1Q13136 1202 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 ATP1A4Q13733 1029 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 TANGO2Q6ICL3 276 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 KLHL17Q6TDP4 642 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 FAM43BQ6ZT52 329 aaPredicted RBP5.06□□□□□ -1.6
NIPBL-207ENST00000513819 MAVSQ7Z434 540 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 GLG1Q92896 1179 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 FUBP1Q96AE4 644 aaKnown RBP5.06□□□□□ -1.6
NIPBL-207ENST00000513819 GCC1Q96CN9 775 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 ZDHHC12Q96GR4 267 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 HAPLN3Q96S86 360 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 NRDE2Q9H7Z3 1164 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 SLC2A4RGQ9NR83 387 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 TBCCD1Q9NVR7 557 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 PRDM4Q9UKN5 801 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 RIMKLBQ9ULI2 386 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 CA14Q9ULX7 337 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 FZD1Q9UP38 647 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 TSC22D4Q9Y3Q8 395 aa5.06□□□□□ -1.6
NIPBL-207ENST00000513819 NTSR2O95665 410 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 ANXA6P08133 673 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 SRGNP10124 158 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 HSD3B1P14060 373 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 RBL1P28749 1068 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 AKT1P31749 480 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 HTR7P34969 479 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 MAPK9P45984 424 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 MTHFSP49914 203 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 TIRAPP58753 221 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 GRM4Q14833 912 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 TRIM71Q2Q1W2 868 aaKnown RBP5.05□□□□□ -1.6
NIPBL-207ENST00000513819 FBLN7Q53RD9 439 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 DTX2Q86UW9 622 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 ARHGEF19Q8IW93 802 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 CCDC117Q8IWD4 279 aaPredicted RBP5.05□□□□□ -1.6
NIPBL-207ENST00000513819 SYNE4Q8N205 404 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 FSTL5Q8N475 847 aaPredicted RBP5.05□□□□□ -1.6
NIPBL-207ENST00000513819 METTL25Q8N6Q8 603 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 MBD3L2Q8NHZ7 208 aaPredicted RBP5.05□□□□□ -1.6
NIPBL-207ENST00000513819 SCAMP5Q8TAC9 235 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 OTUD7AQ8TE49 926 aaPredicted RBP5.05□□□□□ -1.6
NIPBL-207ENST00000513819 ABHD5Q8WTS1 349 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 CACTINQ8WUQ7 758 aaKnown RBP5.05□□□□□ -1.6
NIPBL-207ENST00000513819 RUBCNQ92622 972 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 RILPL2Q969X0 211 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 R3HDM4Q96D70 268 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 FAM167BQ9BTA0 163 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 VN1R3Q9BXE9 311 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 INO80BQ9C086 356 aaPredicted RBP5.05□□□□□ -1.6
NIPBL-207ENST00000513819 TP63Q9H3D4 680 aaPredicted RBP5.05□□□□□ -1.6
NIPBL-207ENST00000513819 GLOD4Q9HC38 313 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 CASS4Q9NQ75 786 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 FSCN3Q9NQT6 498 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 HELLSQ9NRZ9 838 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 RRN3Q9NYV6 651 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 SRP68Q9UHB9 627 aaKnown RBP5.05□□□□□ -1.6
NIPBL-207ENST00000513819 RAPGEFL1Q9UHV5 662 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 HERC5Q9UII4 1024 aaKnown RBP5.05□□□□□ -1.6
NIPBL-207ENST00000513819 GTF2A1LQ9UNN4 478 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 USP22Q9UPT9 525 aa5.05□□□□□ -1.6
NIPBL-207ENST00000513819 DRG1Q9Y295 367 aaKnown RBP5.05□□□□□ -1.6
NIPBL-207ENST00000513819 SLC27A6Q9Y2P4 619 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms