RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 TSC22D4Q9Y3Q8 395 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 TGM2P21980 687 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 HSPA13P48723 471 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 NME5P56597 212 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 GCNT1Q02742 428 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 UBAP2LQ14157 1087 aaKnown RBP8.03□□□□□ -1.12
CLCN3-209ENST00000513761 ZNF268Q14587 947 aaPredicted RBP8.03□□□□□ -1.12
CLCN3-209ENST00000513761 TMEM132DQ14C87 1099 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 BOLA3Q53S33 107 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 DCAF6Q58WW2 860 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 ATF7IP2Q5U623 682 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 TFB1MQ8WVM0 346 aaKnown RBP8.03□□□□□ -1.12
CLCN3-209ENST00000513761 MECRQ9BV79 373 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 EFCAB1Q9HAE3 211 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 C17orf75Q9HAS0 396 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 THAP1Q9NVV9 213 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 ZMYM2Q9UBW7 1377 aa8.03□□□□□ -1.12
CLCN3-209ENST00000513761 MROH7Q68CQ1 1323 aa8.02□□□□□ -1.12
CLCN3-209ENST00000513761 FAM208AQ9UK61 1670 aaKnown RBP8.02□□□□□ -1.12
CLCN3-209ENST00000513761 C5orf60A6NFR6 353 aa8.02□□□□□ -1.12
CLCN3-209ENST00000513761 C3orf70A6NLC5 250 aaPredicted RBP8.02□□□□□ -1.12
CLCN3-209ENST00000513761 SNX2O60749 519 aa8.02□□□□□ -1.12
CLCN3-209ENST00000513761 MT-CO1P00395 513 aa8.02□□□□□ -1.12
CLCN3-209ENST00000513761 FAM58BPP0C7Q3 252 aa8.02□□□□□ -1.12
CLCN3-209ENST00000513761 GLRA2P23416 452 aa8.02□□□□□ -1.12
CLCN3-209ENST00000513761 PTGER2P43116 358 aa8.02□□□□□ -1.12
CLCN3-209ENST00000513761 PPIDQ08752 370 aaKnown RBP8.02□□□□□ -1.12
CLCN3-209ENST00000513761 MAMLD1Q13495 774 aa8.02□□□□□ -1.12
CLCN3-209ENST00000513761 CAPRIN1Q14444 709 aaKnown RBP8.02□□□□□ -1.12
CLCN3-209ENST00000513761 LPCAT2Q7L5N7 544 aa8.02□□□□□ -1.12
CLCN3-209ENST00000513761 POLNQ7Z5Q5 900 aa8.02□□□□□ -1.12
CLCN3-209ENST00000513761 TDRD5Q8NAT2 981 aaKnown RBP8.02□□□□□ -1.12
CLCN3-209ENST00000513761 WNK4Q96J92 1243 aa8.02□□□□□ -1.12
CLCN3-209ENST00000513761 CATSPER2Q96P56 530 aa8.02□□□□□ -1.12
CLCN3-209ENST00000513761 CPSF3Q9UKF6 684 aaKnown RBP8.02□□□□□ -1.12
CLCN3-209ENST00000513761 SDR42E2A6NKP2 422 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 C2CD2LO14523 706 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 PEX1O43933 1283 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 MRPS22P82650 360 aaKnown RBP8.02□□□□□ -1.13
CLCN3-209ENST00000513761 SEL1L3Q68CR1 1132 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 CES3Q6UWW8 571 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 CLNKQ7Z7G1 428 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 BBS5Q8N3I7 341 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 ZSCAN18Q8TBC5 510 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-209ENST00000513761 RXFP2Q8WXD0 754 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 ZBTB18Q99592 522 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 FRMD8P1Q9BZ68 369 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-209ENST00000513761 AGO4Q9HCK5 861 aaKnown RBP8.02□□□□□ -1.13
CLCN3-209ENST00000513761 GRHL1Q9NZI5 618 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 AJAP1Q9UKB5 411 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-209ENST00000513761 SLC12A4Q9UP95 1085 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 ADGRA3Q8IWK6 1321 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 INPP1P49441 399 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 RBP5P82980 135 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 DAB2P98082 770 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 BST1Q10588 318 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 AMHR2Q16671 573 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 FAM172AQ8WUF8 416 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 HPDLQ96IR7 371 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 ZBTB45Q96K62 511 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-209ENST00000513761 SLITRK1Q96PX8 696 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 CGRRF1Q99675 332 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 TMEM79Q9BSE2 394 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 COPS7BQ9H9Q2 264 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-209ENST00000513761 KCNK4Q9NYG8 393 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 SPATA31A1Q5TZJ5 1347 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 EEF2KO00418 725 aaKnown RBP8.02□□□□□ -1.13
CLCN3-209ENST00000513761 TMCC1O94876 653 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 ICAM1P05362 532 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 PKNOX1P55347 436 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 PTK2BQ14289 1009 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 C16orf72Q14CZ0 275 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 STRA8Q7Z7C7 330 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 METTL23Q86XA0 190 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 PCYOX1LQ8NBM8 494 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 ATG4CQ96DT6 458 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 CLPTM1LQ96KA5 538 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 BEGAINQ9BUH8 593 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 CYP4F12Q9HCS2 524 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 ZNF70Q9UC06 446 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-209ENST00000513761 MAN1A2O60476 641 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 WFS1O76024 890 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 RPL7AP62424 266 aaKnown RBP8.02□□□□□ -1.13
CLCN3-209ENST00000513761 FASTKD3Q14CZ7 662 aaKnown RBP8.02□□□□□ -1.13
CLCN3-209ENST00000513761 PCSK7Q16549 785 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 KCTD21Q4G0X4 260 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 WLSQ5T9L3 541 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 CPNE8Q86YQ8 564 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 KIAA2013Q8IYS2 634 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 KYQ8NBH2 561 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 DDHD1Q8NEL9 900 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 IPMKQ8NFU5 416 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 OR6Y1Q8NGX8 325 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 PRMT6Q96LA8 375 aaPredicted RBP8.02□□□□□ -1.13
CLCN3-209ENST00000513761 ECSITQ9BQ95 431 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 LRRC4CQ9HCJ2 640 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 TCF7L2Q9NQB0 619 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 ARHGEF38Q9NXL2 777 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 MON2Q7Z3U7 1717 aa8.02□□□□□ -1.13
CLCN3-209ENST00000513761 GSC2O15499 205 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms