RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	HLA-C	Q95604	372 aa		15.33	■□□□□ 0.04
MATR3-238	ENST00000512107	PDLIM2	Q96JY6	352 aa		15.33	■□□□□ 0.04
MATR3-238	ENST00000512107	ZNF512	Q96ME7	567 aa	Predicted RBP	15.33	■□□□□ 0.04
MATR3-238	ENST00000512107	ZSWIM3	Q96MP5	696 aa		15.33	■□□□□ 0.04
MATR3-238	ENST00000512107	SLC22A12	Q96S37	553 aa		15.33	■□□□□ 0.04
MATR3-238	ENST00000512107	MIS12	Q9H081	205 aa		15.33	■□□□□ 0.04
MATR3-238	ENST00000512107	NCAN	O14594	1321 aa		15.33	■□□□□ 0.04
MATR3-238	ENST00000512107	DOCK8	Q8NF50	2099 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	C5orf42	Q9H799	3197 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107		A0A1W2PRU2	124 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	YJEFN3	A6XGL0	299 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107		E7ENQ6	273 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	FYN	P06241	537 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	ZDHHC11B	P0C7U3	371 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	CSH1	P0DML2	217 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	CSH2	P0DML3	217 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	HOXB8	P17481	243 aa	Predicted RBP	15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	PTPN2	P17706	415 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	YWHAQ	P27348	245 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	GABRR2	P28476	465 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	DAOA	P59103	153 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	GFPT1	Q06210	699 aa	Predicted RBP	15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	MAPK8IP2	Q13387	824 aa	Predicted RBP	15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	TEAD2	Q15562	447 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	TDRD12	Q587J7	1177 aa	Known RBP	15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	PM20D1	Q6GTS8	502 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	RAD9B	Q6WBX8	426 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	MMS22L	Q6ZRQ5	1243 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	FAM183BP	Q6ZVS7	135 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	RTL10	Q7L3V2	364 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	CNGA4	Q8IV77	575 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	TRMT2B	Q96GJ1	504 aa	Known RBP	15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	PPP1R13B	Q96KQ4	1090 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	MYADM	Q96S97	322 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	ADAM33	Q9BZ11	813 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	PNPLA8	Q9NP80	782 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	SPTLC3	Q9NUV7	552 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	SEPT11	Q9NVA2	429 aa	Known RBP	15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	ADAMTS1	Q9UHI8	967 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	NUDT5	Q9UKK9	219 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107	SCML2	Q9UQR0	700 aa		15.32	■□□□□ 0.04
MATR3-238	ENST00000512107		A0A1W2PQH9	124 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	TCRBV5S1A1T	A0A578	114 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	C2orf78	A6NCI8	922 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	SOWAHD	A6NJG2	315 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	SPDYE4	A6NLX3	237 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	IL9	P15248	144 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	KCNQ1	P51787	676 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	PITX1	P78337	314 aa	Predicted RBP	15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	CENPC	Q03188	943 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	CBX2	Q14781	532 aa	Predicted RBP	15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	LEXM	Q3ZCV2	418 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	PABPC1L	Q4VXU2	614 aa	Known RBP	15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	ACAD10	Q6JQN1	1059 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	MON1B	Q7L1V2	547 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	XYLT1	Q86Y38	959 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	TMEM35B	Q8NCS4	154 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	RIN3	Q8TB24	985 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	STK32A	Q8WU08	396 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	FBXO32	Q969P5	355 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	HSFY1	Q96LI6	401 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	PANX2	Q96RD6	677 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	C11orf70	Q9BRQ4	267 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	PACSIN1	Q9BY11	444 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	NUCKS1	Q9H1E3	243 aa	Known RBP	15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	PIDD1	Q9HB75	910 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	WDR6	Q9NNW5	1121 aa	Known RBP	15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	ST7	Q9NRC1	585 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	IMPACT	Q9P2X3	320 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	TFR2	Q9UP52	801 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	REXO2	Q9Y3B8	237 aa	Known RBP	15.31	■□□□□ 0.04
MATR3-238	ENST00000512107	ASB3	Q9Y575	518 aa		15.31	■□□□□ 0.04
MATR3-238	ENST00000512107		A0A0U1RQJ8	604 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	ZNF840P	A6NDX5	716 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	MDM4	O15151	490 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	ATMIN	O43313	823 aa	Predicted RBP	15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	CLUH	O75153	1309 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	XYLB	O75191	536 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	LSM8	O95777	96 aa	Known RBP	15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	TBX18	O95935	607 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	MMP8	P22894	467 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	SP100	P23497	879 aa	Predicted RBP	15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	GABRB2	P47870	512 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	ZXDB	P98169	803 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	CDK17	Q00537	523 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	ITIH3	Q06033	890 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	VEPH1	Q14D04	833 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	TXNDC8	Q6A555	127 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	OLFML1	Q6UWY5	402 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	PHF13	Q86YI8	300 aa	Predicted RBP	15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	ATRIP	Q8WXE1	791 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	WBP2	Q969T9	261 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	CYP2S1	Q96SQ9	504 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	SLC46A2	Q9BY10	475 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	DNAI2	Q9GZS0	605 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	RNF38	Q9H0F5	515 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	SMG9	Q9H0W8	520 aa	Known RBP	15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	PDCL3	Q9H2J4	239 aa		15.3	■□□□□ 0.04
MATR3-238	ENST00000512107	CCSER2	Q9H7U1	834 aa		15.3	■□□□□ 0.04

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms