RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), human

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GYPA-208	ENST00000512064	PDPK2P	Q6A1A2	396 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	MRM1	Q6IN84	353 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	VHLL	Q6RSH7	139 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064		Q6ZNX1	250 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	LINC00299	Q6ZSB3	139 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	PIK3AP1	Q6ZUJ8	805 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	BRINP3	Q76B58	766 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	TRPM8	Q7Z2W7	1104 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	FAM83A	Q86UY5	434 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	GATAD2A	Q86YP4	633 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	MIB1	Q86YT6	1006 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	UNC45B	Q8IWX7	931 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CDH26	Q8IXH8	852 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	AGGF1	Q8N302	714 aa	eCLIP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	ARRDC4	Q8NCT1	418 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	LINS1	Q8NG48	757 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	LILRB4	Q8NHJ6	448 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	RFWD2	Q8NHY2	731 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	IFI44	Q8TCB0	444 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	SCFD1	Q8WVM8	642 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	INPP5D	Q92835	1189 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	ACSF2	Q96CM8	615 aa	Predicted RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	GRAMD1A	Q96CP6	724 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CHFR	Q96EP1	664 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	DYDC2	Q96IM9	177 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	B3GALT6	Q96L58	329 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	BIRC8	Q96P09	236 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	OPALIN	Q96PE5	141 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	SLC9A7	Q96T83	725 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	YME1L1	Q96TA2	773 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	TCF25	Q9BQ70	676 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	TBCD	Q9BTW9	1192 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	C9orf16	Q9BUW7	83 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	TMPRSS13	Q9BYE2	586 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	NYX	Q9GZU5	481 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	MRPL18	Q9H0U6	180 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	ATXN3L	Q9H3M9	355 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	EHD1	Q9H4M9	534 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	GSX1	Q9H4S2	264 aa	Predicted RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064		Q9H521	79 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	STN1	Q9H668	368 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	AKTIP	Q9H8T0	292 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	SP140L	Q9H930	580 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CAB39L	Q9H9S4	337 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	HOMER2	Q9NSB8	354 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	TXLNG	Q9NUQ3	528 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CRIM1	Q9NZV1	1036 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	NYAP2	Q9P242	653 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	SUCO	Q9UBS9	1254 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	APEX2	Q9UBZ4	518 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	KLHL3	Q9UH77	587 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	PFDN2	Q9UHV9	154 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	FBXO10	Q9UK96	956 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	RIMKLB	Q9ULI2	386 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	ERVK-11	Q9UQG0	969 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	B3GNT3	Q9Y2A9	372 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	CORIN	Q9Y5Q5	1042 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	WDR7	Q9Y4E6	1490 aa		4.24	□□□□□ -1.73
GYPA-208	ENST00000512064	MROH7	Q68CQ1	1323 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	LTBP3	Q9NS15	1303 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	SAMD9	Q5K651	1589 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	BLM	P54132	1417 aa	Predicted RBP	4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	CACNB4	O00305	520 aa	Predicted RBP	4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	VWA5A	O00534	786 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	IKBKB	O14920	756 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	SLC7A4	O43246	635 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	SUSD5	O60279	629 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	TSPAN3	O60637	253 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	DNAJA2	O60884	412 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	ADAM11	O75078	769 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	ATP9A	O75110	1047 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	RFPL3	O75679	317 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	CCNDBP1	O95273	360 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	LYPLA2	O95372	231 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	SYF2	O95926	243 aa	Known RBP	4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	TFRC	P02786	760 aa	Known RBP	4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	PGR	P06401	933 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	CTSB	P07858	339 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	ANXA6	P08133	673 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	ACTN1	P12814	892 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	HPGD	P15428	266 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	NPR1	P16066	1061 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	JAK1	P23458	1154 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	GNA11	P29992	359 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	GRK4	P32298	578 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	TTK	P33981	857 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	CCT3	P49368	545 aa	Known RBP	4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	HSD17B4	P51659	736 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	VAV2	P52735	878 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	CACNA2D1	P54289	1103 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	C21orf58	P58505	322 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	GNG11	P61952	73 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	CCZ1B	P86790	482 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	CCZ1	P86791	482 aa	Predicted RBP	4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	GUCY1A3	Q02108	690 aa		4.23	□□□□□ -1.73
GYPA-208	ENST00000512064	PLOD1	Q02809	727 aa	Predicted RBP	4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms