RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 C8orf76Q96K31 380 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 TM7SF3Q9NS93 570 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 TOR4AQ9NXH8 423 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 MAGEC2Q9UBF1 373 aaPredicted RBP12.37□□□□□ -0.43
RNF4-216ENST00000511859 L1RE1Q9UN81 338 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 CYP8B1Q9UNU6 501 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 PCDHGB2Q9Y5G2 931 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 CPQQ9Y646 472 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 MGAQ8IWI9 3026 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 E2F8A0AVK6 867 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 GABRDO14764 452 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 CAPN9O14815 690 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 FLRT2O43155 660 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 IL18RAPO95256 599 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 PLA2G4BP0C869 781 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 ACAT1P24752 427 aaKnown RBP12.36□□□□□ -0.43
RNF4-216ENST00000511859 GRIK1P39086 918 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 GNL2Q13823 731 aaKnown RBP12.36□□□□□ -0.43
RNF4-216ENST00000511859 SUZ12Q15022 739 aaKnown RBP12.36□□□□□ -0.43
RNF4-216ENST00000511859 ZRSR1Q15695 479 aaKnown RBP12.36□□□□□ -0.43
RNF4-216ENST00000511859 ARSHQ5FYA8 562 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 LY6G5CQ5SRR4 150 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 SLC39A4Q6P5W5 647 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 ETFBKMTQ8IXQ9 262 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 MYCT1Q8N699 235 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 RHBDD1Q8TEB9 315 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 IPO4Q8TEX9 1081 aaKnown RBP12.36□□□□□ -0.43
RNF4-216ENST00000511859 TTLL2Q9BWV7 592 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 PRORYQ9H606 182 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 GAREM1Q9H706 876 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 CFAP97Q9P2B7 532 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 AGO2Q9UKV8 859 aaKnown RBP12.36□□□□□ -0.43
RNF4-216ENST00000511859 STYXL1Q9Y6J8 313 aa12.36□□□□□ -0.43
RNF4-216ENST00000511859 ATMQ13315 3056 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 K7ENM7 598 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 TRAK2O60296 914 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 CILPO75339 1184 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 TULP3O75386 442 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 OAS1P00973 400 aaKnown RBP12.35□□□□□ -0.43
RNF4-216ENST00000511859 ATXN1LP0C7T5 689 aaKnown RBP12.35□□□□□ -0.43
RNF4-216ENST00000511859 NDUFV2P19404 249 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 MAOBP27338 520 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 MATKP42679 507 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 ANAPC15P60006 121 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 GTF2BQ00403 316 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 MAPRE1Q15691 268 aaKnown RBP12.35□□□□□ -0.43
RNF4-216ENST00000511859 SMAD1Q15797 465 aaKnown RBP12.35□□□□□ -0.43
RNF4-216ENST00000511859 IL17AQ16552 155 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 LRRC69Q6ZNQ3 347 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 DPH6Q7L8W6 267 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 METTL3Q86U44 580 aaKnown RBP12.35□□□□□ -0.43
RNF4-216ENST00000511859 ZNF843Q8N446 348 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 TOP6BLQ8N6T0 577 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 NAT16Q8N8M0 369 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 TERB1Q8NA31 727 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 FBXO18Q8NFZ0 1043 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 CADM4Q8NFZ8 388 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 PIP4K2CQ8TBX8 421 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 CACTINQ8WUQ7 758 aaKnown RBP12.35□□□□□ -0.43
RNF4-216ENST00000511859 DCBLD2Q96PD2 775 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 PARVGQ9HBI0 331 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 CD248Q9HCU0 757 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 GDAP2Q9NXN4 497 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 PCDHB6Q9Y5E3 794 aa12.35□□□□□ -0.43
RNF4-216ENST00000511859 MYH10P35580 1976 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 NPHP3-ACAD11A0A0J9YXS1 232 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 HOXC11O43248 304 aaPredicted RBP12.34□□□□□ -0.43
RNF4-216ENST00000511859 ABL1P00519 1130 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 HLA-EP13747 358 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 ANXA13P27216 316 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 CD6P30203 668 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 USP46P62068 366 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 NOP14P78316 857 aaKnown RBP12.34□□□□□ -0.43
RNF4-216ENST00000511859 POSTNQ15063 836 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 C10orf76Q5T2E6 689 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 CHPFQ8IZ52 775 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 LRRC52Q8N7C0 313 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 MRGPRX1Q96LB2 322 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 GABRG3Q99928 467 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 DUSP9Q99956 384 aaKnown RBP12.34□□□□□ -0.43
RNF4-216ENST00000511859 PRDM16Q9HAZ2 1276 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 SMPD4Q9NXE4 827 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 HCN2Q9UL51 889 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 AGAP1Q9UPQ3 857 aa12.34□□□□□ -0.43
RNF4-216ENST00000511859 MEI4A8MW99 385 aa12.33□□□□□ -0.44
RNF4-216ENST00000511859 ANKRD63C9JTQ0 380 aa12.33□□□□□ -0.44
RNF4-216ENST00000511859 J3QKU1 62 aa12.33□□□□□ -0.44
RNF4-216ENST00000511859 GFRA2O00451 464 aa12.33□□□□□ -0.44
RNF4-216ENST00000511859 TRIM66O15016 1216 aa12.33□□□□□ -0.44
RNF4-216ENST00000511859 BCAT2O15382 392 aaPredicted RBP12.33□□□□□ -0.44
RNF4-216ENST00000511859 TNFSF14O43557 240 aa12.33□□□□□ -0.44
RNF4-216ENST00000511859 FAM13AO94988 1023 aa12.33□□□□□ -0.44
RNF4-216ENST00000511859 ITGB3P05106 788 aa12.33□□□□□ -0.44
RNF4-216ENST00000511859 MBL2P11226 248 aaPredicted RBP12.33□□□□□ -0.44
RNF4-216ENST00000511859 BDNFP23560 247 aa12.33□□□□□ -0.44
RNF4-216ENST00000511859 POLR2BP30876 1174 aaKnown RBP12.33□□□□□ -0.44
RNF4-216ENST00000511859 EIF2S3P41091 472 aaKnown RBP12.33□□□□□ -0.44
RNF4-216ENST00000511859 WASP42768 502 aa12.33□□□□□ -0.44
RNF4-216ENST00000511859 TOB1P50616 345 aaPredicted RBP12.33□□□□□ -0.44
RNF4-216ENST00000511859 ZNF131P52739 623 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms