RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 USP46P62068 366 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 RPL10AP62906 217 aaKnown RBP16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 GOLGA7BQ2TAP0 167 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 ARHGAP15Q53QZ3 475 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 TXNDC8Q6A555 127 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 MFSD6LQ8IWD5 586 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 FAM71AQ8IYT1 594 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 ZFYVE19Q96K21 471 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 HNRNPABQ99729 332 aaKnown RBP16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 DDX23Q9BUQ8 820 aaKnown RBP16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 STK33Q9BYT3 514 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 BRD9Q9H8M2 597 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 DLGAP2Q9P1A6 1054 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 MYO16Q9Y6X6 1858 aa16.44■□□□□ 0.22
SH3TC1-220ENST00000511002 ARNTLO00327 626 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 O00370 1275 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 AP1G2O75843 785 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 FGF19O95750 216 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 TPM3P06753 285 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 VDRP11473 427 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 TARSP26639 723 aaKnown RBP16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 PFKPQ01813 784 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 SGO2Q562F6 1265 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 ARHGAP17Q68EM7 881 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 VSTM1Q6UX27 236 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 TPRG1Q6ZUI0 275 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 CCDC105Q8IYK2 499 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 MAB21L3Q8N8X9 362 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 PJA1Q8NG27 643 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 SMARCD1Q96GM5 515 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 MYRFLQ96LU7 910 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 GCNAQ96QF7 691 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 TTYH3Q9C0H2 523 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 CCL26Q9Y258 94 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 DAAM1Q9Y4D1 1078 aa16.43■□□□□ 0.22
SH3TC1-220ENST00000511002 KANSL1LA0AUZ9 987 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 F8VP50 259 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 BEST1O76090 585 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 FAM200BP0CF97 657 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 GNA15P30679 374 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 CLCN1P35523 988 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 GRIK1P39086 918 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 PTPN5P54829 565 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 PRKCQQ04759 706 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 CACNA2D4Q7Z3S7 1137 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 SLC47A2Q86VL8 602 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 TTC30AQ86WT1 665 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 CMTM8Q8IZV2 173 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 DTWD2Q8NBA8 298 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 ZMIZ2Q8NF64 920 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 DEPDC1BQ8WUY9 529 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 BAP1Q92560 729 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 DNASE1L2Q92874 299 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 TRMT2BQ96GJ1 504 aaKnown RBP16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 SPAG5Q96R06 1193 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 SLC22A12Q96S37 553 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 KCNK16Q96T55 309 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 SMOQ99835 787 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 TRIM5Q9C035 493 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 LTB4R2Q9NPC1 389 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 TSPAN16Q9UKR8 245 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 CACNA1IQ9P0X4 2223 aa16.42■□□□□ 0.22
SH3TC1-220ENST00000511002 ZNF263O14978 683 aa16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 THAP12O43422 761 aa16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 GFPT2O94808 682 aa16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 SOX5P35711 763 aa16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 SOX9P48436 509 aa16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 MAP3K7CLP57077 242 aa16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 FCHO2Q0JRZ9 810 aa16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 UBXN2BQ14CS0 331 aa16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 CLEC20AQ6ZU45 233 aa16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 TTC8Q8TAM2 541 aa16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 USP13Q92995 863 aaPredicted RBP16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 C8orf48Q96LL4 319 aa16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 DMAP1Q9NPF5 467 aaPredicted RBP16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 KIAA1257Q9ULG3 409 aa16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 SIT1Q9Y3P8 196 aa16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 ITIH6Q6UXX5 1313 aa16.41■□□□□ 0.22
SH3TC1-220ENST00000511002 C2orf78A6NCI8 922 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 TRIM66O15016 1216 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 ANXA13P27216 316 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 STAT1P42224 750 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 ZNF75DP51815 510 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 TNK2Q07912 1038 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 FZD5Q13467 585 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 FIGNQ5HY92 759 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 LCLAT1Q6UWP7 414 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 MON1AQ86VX9 555 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 VSTM4Q8IW00 320 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 UBA3Q8TBC4 463 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 MRPS31Q92665 395 aaKnown RBP16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 IRF7Q92985 503 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 SHDQ96IW2 340 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 SPATA17Q96L03 361 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 CYP2S1Q96SQ9 504 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 PRRX2Q99811 253 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 DUSP16Q9BY84 665 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 CSNK1G1Q9HCP0 422 aa16.4■□□□□ 0.22
SH3TC1-220ENST00000511002 TRPC7Q9HCX4 862 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms