RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 SF3B6Q9Y3B4 125 aaKnown RBP4.8□□□□□ -1.64
CALCOCO2-213ENST00000509112 MTF2Q9Y483 593 aaPredicted RBP4.8□□□□□ -1.64
CALCOCO2-213ENST00000509112 BACE2Q9Y5Z0 518 aa4.8□□□□□ -1.64
CALCOCO2-213ENST00000509112 TICRRQ7Z2Z1 1910 aa4.8□□□□□ -1.64
CALCOCO2-213ENST00000509112 NUP210Q8TEM1 1887 aaPredicted RBP4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 MAP1BP46821 2468 aaKnown RBP4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 ZNF197O14709 1029 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 ADAMTS3O15072 1205 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 CHMP2AO43633 222 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 TADA2AO75478 443 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 CBX7O95931 251 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 TGFB1P01137 390 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 EPHX1P07099 455 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 XRCC6P12956 609 aaKnown RBP eCLIP4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 GCFC2P16383 781 aaKnown RBP4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 MLH1P40692 756 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 AKAP17AQ02040 695 aaKnown RBP4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 MBTD1Q05BQ5 628 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 MTAPQ13126 283 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 EMC2Q15006 297 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 NAB2Q15742 525 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 PSMD5Q16401 504 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 LONRF3Q496Y0 759 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 PABPC1LQ4VXU2 614 aaKnown RBP4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 SLC8B1Q6J4K2 584 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 TPRG1Q6ZUI0 275 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 LONP2Q86WA8 852 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 PLD6Q8N2A8 252 aaKnown RBP4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 SYNPOQ8N3V7 929 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 SPEM1Q8N4L4 309 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 ZNF513Q8N8E2 541 aaPredicted RBP4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 RNF149Q8NC42 400 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 LEMD2Q8NC56 503 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 ITFG1Q8TB96 612 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 TBCKQ8TEA7 893 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 E2F7Q96AV8 911 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 CEP170P1Q96L14 293 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 UROC1Q96N76 676 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 EIF2AQ9BY44 585 aaKnown RBP4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 GPR88Q9GZN0 384 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 PRDM14Q9GZV8 571 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 ZSWIM4Q9H7M6 989 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 TRPV4Q9HBA0 871 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 LRRC4CQ9HCJ2 640 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 SEMA4GQ9NTN9 838 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 ANKEF1Q9NU02 776 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 SNTG2Q9NY99 539 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 DNMT3BQ9UBC3 853 aaKnown RBP4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 MTRRQ9UBK8 725 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 GPR179Q6PRD1 2367 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 COL4A3Q01955 1670 aa4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 KIF26AQ9ULI4 1882 aaPredicted RBP4.79□□□□□ -1.64
CALCOCO2-213ENST00000509112 SPAG17Q6Q759 2223 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 TRIP11Q15643 1979 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 WDR87Q6ZQQ6 2873 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 TMEM150BA6NC51 233 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 TMEM8BA6NDV4 472 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 EPB41L2O43491 1005 aaKnown RBP4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 AKAP3O75969 853 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 ABLIM3O94929 683 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 DEXIO95424 95 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 THP07101 528 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 PROS1P07225 676 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 RHOP08100 348 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 ZNF806P0C7X5 589 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 SPATA31D3P0C874 917 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 SRGAP2CP0DJJ0 459 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 CHRNB1P11230 501 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 PTPN2P17706 415 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 PSMC3P17980 439 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 ARF4P18085 180 aaPredicted RBP4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 FCARP24071 287 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 YWHABP31946 246 aaKnown RBP4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 ARL2P36404 184 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 CXCL12P48061 93 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 EPHA5P54756 1037 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 NPEPPSP55786 919 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 ZNF445P59923 1031 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 DMWDQ09019 674 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 IFRD2Q12894 506 aaPredicted RBP4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 LRRC32Q14392 662 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 NPY5RQ15761 445 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 SLC10A6Q3KNW5 377 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 DGKKQ5KSL6 1271 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 TDRD10Q5VZ19 366 aaKnown RBP4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 TPGS2Q68CL5 300 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 PLA2G4FQ68DD2 849 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 CDCA2Q69YH5 1023 aaPredicted RBP4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 MRM1Q6IN84 353 aaKnown RBP4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 PRSS55Q6UWB4 352 aaPredicted RBP4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 RNF111Q6ZNA4 994 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 SPATA31D4Q6ZUB0 917 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 WDR5BQ86VZ2 330 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 TCEAL8Q8IYN2 117 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 BLIDQ8IZY5 108 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 FAM181AQ8N9Y4 354 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 ZNF461Q8TAF7 563 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 SLC7A14Q8TBB6 771 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 TMEM143Q96AN5 459 aa4.78□□□□□ -1.64
CALCOCO2-213ENST00000509112 CCDC120Q96HB5 630 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms