RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 ZSWIM1Q9BR11 485 aa9.19□□□□□ -0.94
SNCA-211ENST00000508895 TUBGCP2Q9BSJ2 902 aa9.19□□□□□ -0.94
SNCA-211ENST00000508895 NAT10Q9H0A0 1025 aaKnown RBP9.19□□□□□ -0.94
SNCA-211ENST00000508895 EBF3Q9H4W6 596 aa9.19□□□□□ -0.94
SNCA-211ENST00000508895 CBX8Q9HC52 389 aa9.19□□□□□ -0.94
SNCA-211ENST00000508895 TRPC7Q9HCX4 862 aa9.19□□□□□ -0.94
SNCA-211ENST00000508895 KRT82Q9NSB4 513 aa9.19□□□□□ -0.94
SNCA-211ENST00000508895 TAB2Q9NYJ8 693 aa9.19□□□□□ -0.94
SNCA-211ENST00000508895 IL37Q9NZH6 218 aa9.19□□□□□ -0.94
SNCA-211ENST00000508895 CHORDC1Q9UHD1 332 aaPredicted RBP9.19□□□□□ -0.94
SNCA-211ENST00000508895 WNT6Q9Y6F9 365 aa9.19□□□□□ -0.94
SNCA-211ENST00000508895 PIAS3Q9Y6X2 628 aa9.19□□□□□ -0.94
SNCA-211ENST00000508895 R4GN57 208 aa9.19□□□□□ -0.94
SNCA-211ENST00000508895 GTPBP10A4D1E9 387 aaKnown RBP9.18□□□□□ -0.94
SNCA-211ENST00000508895 ZNF840PA6NDX5 716 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 RNF225M0QZC1 329 aaPredicted RBP9.18□□□□□ -0.94
SNCA-211ENST00000508895 TULP2O00295 520 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 ACACBO00763 2458 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 CHADO15335 359 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 AP1G2O75843 785 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 FRYLO94915 3013 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 OAS1P00973 400 aaKnown RBP9.18□□□□□ -0.94
SNCA-211ENST00000508895 SP9P0CG40 484 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 CHRNB1P11230 501 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 PRKCSHP14314 528 aaPredicted RBP9.18□□□□□ -0.94
SNCA-211ENST00000508895 CTHP32929 405 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 SLC5A3P53794 718 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 RAD23BP54727 409 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 MAP3K7CLP57077 242 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 ZNF445P59923 1031 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 APBA1Q02410 837 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 LRMPQ12912 555 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 MTAPQ13126 283 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 PON2Q15165 354 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 TAF12Q16514 161 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 ARHGAP15Q53QZ3 475 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 PPP1R26Q5T8A7 1209 aaPredicted RBP9.18□□□□□ -0.94
SNCA-211ENST00000508895 TRIM65Q6PJ69 517 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 LRSAM1Q6UWE0 723 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 C4orf50Q6ZRC1 276 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 DENND5BQ6ZUT9 1274 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 GVINP1Q7Z2Y8 2422 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 LUZP1Q86V48 1076 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 CREBRFQ8IUR6 639 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 ARHGEF19Q8IW93 802 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 SLC4A11Q8NBS3 891 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 NDRG1Q92597 394 aaKnown RBP9.18□□□□□ -0.94
SNCA-211ENST00000508895 ATOH1Q92858 354 aaPredicted RBP9.18□□□□□ -0.94
SNCA-211ENST00000508895 JAKMIP2Q96AA8 810 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 ZFRQ96KR1 1074 aaKnown RBP9.18□□□□□ -0.94
SNCA-211ENST00000508895 CRACR2AQ9BSW2 395 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 GPR88Q9GZN0 384 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 INTS2Q9H0H0 1204 aaKnown RBP9.18□□□□□ -0.94
SNCA-211ENST00000508895 NDST4Q9H3R1 872 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 NMUR1Q9HB89 426 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 TRPV5Q9NQA5 729 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 TDP1Q9NUW8 608 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 GMIPQ9P107 970 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 NCOR2Q9Y618 2525 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 DNAH14Q0VDD8 3507 aa9.18□□□□□ -0.94
SNCA-211ENST00000508895 LGALS16A8MUM7 142 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 SPECC1L-ADORA2AF8WAN1 911 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 MDM4O15151 490 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 OLFM2O95897 454 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 TBX18O95935 607 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 TDGF1P13385 188 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 P4HA1P13674 534 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 COPB1P53618 953 aaKnown RBP9.17□□□□□ -0.94
SNCA-211ENST00000508895 PFKPQ01813 784 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 CUL2Q13617 745 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 VWA3BQ502W6 1294 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 FSTL4Q6MZW2 842 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 DPY19L2P1Q6NXN4 242 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 CLEC20AQ6ZU45 233 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 ERMP1Q7Z2K6 904 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 C1orf210Q8IVY1 113 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 CELF5Q8N6W0 485 aaKnown RBP9.17□□□□□ -0.94
SNCA-211ENST00000508895 CCDC150Q8NCX0 1101 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 SH3RF2Q8TEC5 729 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 TFAP2BQ92481 460 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 FAM3CQ92520 227 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 MRPS31Q92665 395 aaKnown RBP9.17□□□□□ -0.94
SNCA-211ENST00000508895 IRF7Q92985 503 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 KREMEN1Q96MU8 473 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 NT5C1BQ96P26 610 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 MED10Q9BTT4 135 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 TSPY26PQ9H489 355 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 CCSER2Q9H7U1 834 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 LMAN1LQ9HAT1 526 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 CSNK1G1Q9HCP0 422 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 SIX2Q9NPC8 291 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 CISHQ9NSE2 258 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 SMPD4Q9NXE4 827 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 OBP2AQ9NY56 170 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 LIMA1Q9UHB6 759 aaKnown RBP9.17□□□□□ -0.94
SNCA-211ENST00000508895 AJAP1Q9UKB5 411 aaPredicted RBP9.17□□□□□ -0.94
SNCA-211ENST00000508895 NUDT5Q9UKK9 219 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 ZNF292O60281 2723 aa9.17□□□□□ -0.94
SNCA-211ENST00000508895 FAM92AA1XBS5 289 aa9.16□□□□□ -0.94
SNCA-211ENST00000508895 LEFTY2O00292 366 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms