RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 MEA1Q16626 185 aa20.96■□□□□ 0.95
SNX25-204ENST00000506896 DPY19L2P1Q6NXN4 242 aa20.96■□□□□ 0.95
SNX25-204ENST00000506896 TTC30AQ86WT1 665 aa20.96■□□□□ 0.95
SNX25-204ENST00000506896 TFAP2BQ92481 460 aa20.96■□□□□ 0.95
SNX25-204ENST00000506896 KIF9Q9HAQ2 790 aa20.96■□□□□ 0.95
SNX25-204ENST00000506896 ARHGEF3Q9NR81 526 aa20.96■□□□□ 0.95
SNX25-204ENST00000506896 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.96■□□□□ 0.95
SNX25-204ENST00000506896 NUP210Q8TEM1 1887 aaPredicted RBP20.95■□□□□ 0.94
SNX25-204ENST00000506896 USP17L7P0C7H9 530 aa20.95■□□□□ 0.94
SNX25-204ENST00000506896 PSMC3P17980 439 aa20.95■□□□□ 0.94
SNX25-204ENST00000506896 BRD2P25440 801 aaKnown RBP20.95■□□□□ 0.94
SNX25-204ENST00000506896 USP8P40818 1118 aa20.95■□□□□ 0.94
SNX25-204ENST00000506896 KIF11P52732 1056 aa20.95■□□□□ 0.94
SNX25-204ENST00000506896 STARD6P59095 220 aa20.95■□□□□ 0.94
SNX25-204ENST00000506896 ZNF268Q14587 947 aaPredicted RBP20.95■□□□□ 0.94
SNX25-204ENST00000506896 FILIP1LQ4L180 1135 aa20.95■□□□□ 0.94
SNX25-204ENST00000506896 SNX30Q5VWJ9 437 aa20.95■□□□□ 0.94
SNX25-204ENST00000506896 PIGZQ86VD9 579 aa20.95■□□□□ 0.94
SNX25-204ENST00000506896 ERGIC2Q96RQ1 377 aa20.95■□□□□ 0.94
SNX25-204ENST00000506896 TRPC7Q9HCX4 862 aa20.95■□□□□ 0.94
SNX25-204ENST00000506896 SCML2Q9UQR0 700 aa20.95■□□□□ 0.94
SNX25-204ENST00000506896 GOLGA6L19H0YKK7 550 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 GNA15P30679 374 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 VIPR2P41587 438 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 PLA2G4AP47712 749 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 TUBP50607 506 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 BPIFB4P59827 614 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 PFKPQ01813 784 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 NHLH1Q02575 133 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 PDE4CQ08493 712 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 RAPGEF1Q13905 1077 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 PKDCCQ504Y2 493 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 SLC44A4Q53GD3 710 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 RAB41Q5JT25 222 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 VITQ6UXI7 678 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 GPRIN1Q7Z2K8 1008 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 MFSD6LQ8IWD5 586 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 CELF5Q8N6W0 485 aaKnown RBP20.94■□□□□ 0.94
SNX25-204ENST00000506896 NAA15Q9BXJ9 866 aaKnown RBP20.94■□□□□ 0.94
SNX25-204ENST00000506896 TLR8Q9NR97 1041 aaKnown RBP20.94■□□□□ 0.94
SNX25-204ENST00000506896 TDP1Q9NUW8 608 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 SIK3Q9Y2K2 1263 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 FHOD1Q9Y613 1164 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 USP3Q9Y6I4 520 aa20.94■□□□□ 0.94
SNX25-204ENST00000506896 HEPACAM2A8MVW5 462 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 M0QYV0 167 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 GALR2O43603 387 aaPredicted RBP20.93■□□□□ 0.94
SNX25-204ENST00000506896 ABL1P00519 1130 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 CKMP06732 381 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 ZDHHC11BP0C7U3 371 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 HDCP19113 662 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 PTK2Q05397 1052 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 DRAP1Q14919 205 aaPredicted RBP20.93■□□□□ 0.94
SNX25-204ENST00000506896 SYCP1Q15431 976 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 CCDC186Q7Z3E2 898 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 LUZP1Q86V48 1076 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 FAM71AQ8IYT1 594 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 KCTD13Q8WZ19 329 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 PCMTD1Q96MG8 357 aaPredicted RBP20.93■□□□□ 0.94
SNX25-204ENST00000506896 ZSWIM1Q9BR11 485 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 DDX23Q9BUQ8 820 aaKnown RBP20.93■□□□□ 0.94
SNX25-204ENST00000506896 TRMT61BQ9BVS5 477 aaKnown RBP20.93■□□□□ 0.94
SNX25-204ENST00000506896 STK33Q9BYT3 514 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 TBC1D17Q9HA65 648 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 FAM207AQ9NSI2 230 aaPredicted RBP20.93■□□□□ 0.94
SNX25-204ENST00000506896 GMIPQ9P107 970 aa20.93■□□□□ 0.94
SNX25-204ENST00000506896 AJAP1Q9UKB5 411 aaPredicted RBP20.93■□□□□ 0.94
SNX25-204ENST00000506896 ANAPC1Q9H1A4 1944 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 F5P12259 2224 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 C2orf78A6NCI8 922 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 FOXN3O00409 490 aaPredicted RBP20.92■□□□□ 0.94
SNX25-204ENST00000506896 THAP12O43422 761 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 PRAMEF12O95522 483 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 OAS1P00973 400 aaKnown RBP20.92■□□□□ 0.94
SNX25-204ENST00000506896 PSEN1P49768 467 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 PTPN5P54829 565 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 FCHO2Q0JRZ9 810 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 HECTD3Q5T447 861 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 YAF2Q8IY57 180 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 NEK11Q8NG66 645 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 UBA3Q8TBC4 463 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 ZNF606Q8WXB4 792 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 USP13Q92995 863 aaPredicted RBP20.92■□□□□ 0.94
SNX25-204ENST00000506896 RSPRY1Q96DX4 576 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 SHDQ96IW2 340 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 GANQ9H2C0 597 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 LRRC4Q9HBW1 653 aa20.92■□□□□ 0.94
SNX25-204ENST00000506896 RTN4Q9NQC3 1192 aaKnown RBP20.92■□□□□ 0.94
SNX25-204ENST00000506896 CHORDC1Q9UHD1 332 aaPredicted RBP20.92■□□□□ 0.94
SNX25-204ENST00000506896 CYP26A1O43174 497 aa20.91■□□□□ 0.94
SNX25-204ENST00000506896 OLFM2O95897 454 aa20.91■□□□□ 0.94
SNX25-204ENST00000506896 COL4A3Q01955 1670 aa20.91■□□□□ 0.94
SNX25-204ENST00000506896 PRKCQQ04759 706 aa20.91■□□□□ 0.94
SNX25-204ENST00000506896 MLF2Q15773 248 aaPredicted RBP20.91■□□□□ 0.94
SNX25-204ENST00000506896 LRSAM1Q6UWE0 723 aa20.91■□□□□ 0.94
SNX25-204ENST00000506896 ARHGAP18Q8N392 663 aa20.91■□□□□ 0.94
SNX25-204ENST00000506896 ARL14EPQ8N8R7 260 aaPredicted RBP20.91■□□□□ 0.94
SNX25-204ENST00000506896 BPIFB1Q8TDL5 484 aa20.91■□□□□ 0.94
SNX25-204ENST00000506896 SLC35F5Q8WV83 523 aa20.91■□□□□ 0.94
SNX25-204ENST00000506896 DNASE1L2Q92874 299 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms