RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 TTC30AQ86WT1 665 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 PHTF2Q8N3S3 785 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 FSIP1Q8NA03 581 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 IL17RCQ8NAC3 791 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 RDH13Q8NBN7 331 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 TXNDC5Q8NBS9 432 aaKnown RBP6.24□□□□□ -1.41
GYPB-205ENST00000505583 OLIG1Q8TAK6 271 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 SPATA18Q8TC71 538 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 PLEKHO2Q8TD55 490 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 ACDQ96AP0 544 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 CCDC127Q96BQ5 260 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 ANKRD36BP1Q96IX9 119 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 ZFRQ96KR1 1074 aaKnown RBP6.24□□□□□ -1.41
GYPB-205ENST00000505583 CNOT6LQ96LI5 555 aaKnown RBP6.24□□□□□ -1.41
GYPB-205ENST00000505583 KCNK16Q96T55 309 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 MMS19Q96T76 1030 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 B3GNT5Q9BYG0 378 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 XYLT2Q9H1B5 865 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 FSCN3Q9NQT6 498 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 HSPBP1Q9NZL4 362 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 CFAP97Q9P2B7 532 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 MBD1Q9UIS9 605 aaPredicted RBP6.24□□□□□ -1.41
GYPB-205ENST00000505583 CDH9Q9ULB4 789 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 MMP17Q9ULZ9 603 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 MTMR6Q9Y217 621 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 CPQQ9Y646 472 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 MYO18AQ92614 2054 aaKnown RBP6.24□□□□□ -1.41
GYPB-205ENST00000505583 PCDH15Q96QU1 1955 aa6.24□□□□□ -1.41
GYPB-205ENST00000505583 ATXN2Q99700 1313 aaKnown RBP6.24□□□□□ -1.41
GYPB-205ENST00000505583 WDFY3Q8IZQ1 3526 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 ASPMQ8IZT6 3477 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 A0A0A0MRY4 1105 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 PPP1R3GB7ZBB8 358 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 KHNYNO15037 678 aaKnown RBP6.23□□□□□ -1.41
GYPB-205ENST00000505583 CLIC2O15247 247 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 COCHO43405 550 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 RHOBTB1O94844 696 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 KAT7O95251 611 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 KLF8O95600 359 aaPredicted RBP6.23□□□□□ -1.41
GYPB-205ENST00000505583 NFATC1O95644 943 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 TNNC2P02585 160 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 PROS1P07225 676 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 DLATP10515 647 aaKnown RBP6.23□□□□□ -1.41
GYPB-205ENST00000505583 PTPN1P18031 435 aaKnown RBP6.23□□□□□ -1.41
GYPB-205ENST00000505583 GNL1P36915 607 aaPredicted RBP6.23□□□□□ -1.41
GYPB-205ENST00000505583 DHPSP49366 369 aaPredicted RBP6.23□□□□□ -1.41
GYPB-205ENST00000505583 CASP4P49662 377 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 CYP2J2P51589 502 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 CDH8P55286 799 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 MYL6P60660 151 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 MRPS21P82921 87 aaKnown RBP6.23□□□□□ -1.41
GYPB-205ENST00000505583 KDSRQ06136 332 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 EHHADHQ08426 723 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 ZNF252P-AS1Q0IIN9 211 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 IFRD2Q12894 506 aaPredicted RBP6.23□□□□□ -1.41
GYPB-205ENST00000505583 FOXC1Q12948 553 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 NR1H3Q13133 447 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 ALCAMQ13740 583 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 SNRNP35Q16560 246 aaKnown RBP6.23□□□□□ -1.41
GYPB-205ENST00000505583 DUOXA2Q1HG44 320 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 MAP7D1Q3KQU3 841 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 WDR72Q3MJ13 1102 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 TMEM259Q4ZIN3 620 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 USP39Q53GS9 565 aaKnown RBP6.23□□□□□ -1.41
GYPB-205ENST00000505583 MIB1Q86YT6 1006 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 WDR49Q8IV35 697 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 NELFCDQ8IXH7 590 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 TMEFF1Q8IYR6 380 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 DEFB119Q8N690 84 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 NAT16Q8N8M0 369 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 DEFB124Q8NES8 71 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 OR6B3Q8NGW1 331 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 SCAMP5Q8TAC9 235 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 ZNF507Q8TCN5 953 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 SCFD1Q8WVM8 642 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 PIGKQ92643 395 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 ERLEC1Q96DZ1 483 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 C8orf48Q96LL4 319 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 PNKPQ96T60 521 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 TRIM9Q9C026 710 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 SDCBP2Q9H190 292 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 AGPAT3Q9NRZ7 376 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 KBTBD4Q9NVX7 518 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 TRPM5Q9NZQ8 1165 aa6.23□□□□□ -1.41
GYPB-205ENST00000505583 TFIP11Q9UBB9 837 aaKnown RBP6.23□□□□□ -1.41
GYPB-205ENST00000505583 NXF1Q9UBU9 619 aaKnown RBP6.23□□□□□ -1.41
GYPB-205ENST00000505583 CHORDC1Q9UHD1 332 aaPredicted RBP6.23□□□□□ -1.41
GYPB-205ENST00000505583 ASCC3Q8N3C0 2202 aaKnown RBP6.23□□□□□ -1.41
GYPB-205ENST00000505583 MYH10P35580 1976 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 PI4KAP42356 2102 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 TNFRSF10BO14763 440 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 TACC1O75410 805 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 BEST1O76090 585 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 MBL2P11226 248 aaPredicted RBP6.22□□□□□ -1.41
GYPB-205ENST00000505583 PFKLP17858 780 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 TNNI1P19237 187 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 ANXA13P27216 316 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 TXLNAP40222 546 aa6.22□□□□□ -1.41
GYPB-205ENST00000505583 P2RY2P41231 377 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms