RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 C18orf8Q96DM3 657 aa13.85□□□□□ -0.19
CCSER1-205ENST00000505073 ZNF560Q96MR9 790 aa13.85□□□□□ -0.19
CCSER1-205ENST00000505073 A8MXQ7 604 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 RIPK2O43353 540 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 SMNDC1O75940 238 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCSER1-205ENST00000505073 TCF4P15884 667 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 YY1P25490 414 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 LMO2P25791 158 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 CHRNA3P32297 505 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 SLCO1A2P46721 670 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 C11orf91Q3C1V1 193 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 PPP1R15BQ5SWA1 713 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 AGMOQ6ZNB7 445 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 SLAIN1Q8ND83 568 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 JOSD2Q8TAC2 188 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.84□□□□□ -0.19
CCSER1-205ENST00000505073 UHMK1Q8TAS1 419 aaKnown RBP13.84□□□□□ -0.19
CCSER1-205ENST00000505073 SH3TC2Q8TF17 1288 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 DYDC1Q8WWB3 177 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 PRCCQ92733 491 aaPredicted RBP13.84□□□□□ -0.19
CCSER1-205ENST00000505073 HOMER3Q9NSC5 361 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 IP6K2Q9UHH9 426 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 LIN7AO14910 233 aaPredicted RBP13.84□□□□□ -0.19
CCSER1-205ENST00000505073 RPLP2P05387 115 aaKnown RBP13.84□□□□□ -0.19
CCSER1-205ENST00000505073 PFKMP08237 780 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 KRT16P08779 473 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 HSPA6P17066 643 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 LILRA4P59901 499 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 LCLAT1Q6UWP7 414 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 XYLT1Q86Y38 959 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 DDX27Q96GQ7 796 aaKnown RBP13.84□□□□□ -0.19
CCSER1-205ENST00000505073 FGFR1OP2Q9NVK5 253 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 GGT7Q9UJ14 662 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 TRIM17Q9Y577 477 aa13.84□□□□□ -0.19
CCSER1-205ENST00000505073 A0A1W2PQ45 241 aaPredicted RBP13.83□□□□□ -0.2
CCSER1-205ENST00000505073 A0A1W2PQY0 241 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 MOXD2PA6NHM9 499 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 F8VP50 259 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 PODXLO00592 558 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 RFC1P35251 1148 aaPredicted RBP13.83□□□□□ -0.2
CCSER1-205ENST00000505073 RGS7P49802 495 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 SCNN1GP51170 649 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 SV2CQ496J9 727 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 CAPRIN2Q6IMN6 1127 aaKnown RBP13.83□□□□□ -0.2
CCSER1-205ENST00000505073 HACE1Q8IYU2 909 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 TSPAN18Q96SJ8 248 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 PLCD4Q9BRC7 762 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 ARHGEF3Q9NR81 526 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 GDAP2Q9NXN4 497 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 PCYOX1Q9UHG3 505 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 KIAA1257Q9ULG3 409 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 STRIP2Q9ULQ0 834 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 ARL5CA6NH57 179 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 A8MUI8 341 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 TCP11X1B4DZS4 312 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 LRPAP1P30533 357 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 GNL1P36915 607 aaPredicted RBP13.83□□□□□ -0.2
CCSER1-205ENST00000505073 PNPLA4P41247 253 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 CCDC38Q502W7 563 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 TTC30AQ86WT1 665 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 SLC13A5Q86YT5 568 aaPredicted RBP13.83□□□□□ -0.2
CCSER1-205ENST00000505073 ADAM2Q99965 735 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 FAM124BQ9H5Z6 455 aaPredicted RBP13.83□□□□□ -0.2
CCSER1-205ENST00000505073 STARD7Q9NQZ5 370 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 METTL5Q9NRN9 209 aaKnown RBP13.83□□□□□ -0.2
CCSER1-205ENST00000505073 KLHL11Q9NVR0 708 aa13.83□□□□□ -0.2
CCSER1-205ENST00000505073 THP07101 528 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 KRT3P12035 628 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 RARGP13631 454 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 MSH2P43246 934 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 DSC3Q14574 896 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 ATP13A4Q4VNC1 1196 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 EXOC3L1Q86VI1 746 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 OSTM1Q86WC4 334 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 RHOT1Q8IXI2 618 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 KIF2BQ8N4N8 673 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 EMC1Q8N766 993 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 PRELID2Q8N945 189 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 APPL2Q8NEU8 664 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 ZNF483Q8TF39 744 aaPredicted RBP13.82□□□□□ -0.2
CCSER1-205ENST00000505073 RUNDC3BQ96NL0 473 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 HERPUD2Q9BSE4 406 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 ROPN1BQ9BZX4 212 aaPredicted RBP13.82□□□□□ -0.2
CCSER1-205ENST00000505073 TSPYL2Q9H2G4 693 aaPredicted RBP13.82□□□□□ -0.2
CCSER1-205ENST00000505073 SNX25Q9H3E2 840 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 ROPN1Q9HAT0 212 aaPredicted RBP13.82□□□□□ -0.2
CCSER1-205ENST00000505073 CORO1CQ9ULV4 474 aaPredicted RBP13.82□□□□□ -0.2
CCSER1-205ENST00000505073 ARL2BPQ9Y2Y0 163 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 SIGLEC16A6NMB1 481 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 HUS1O60921 280 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 CKBP12277 381 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 CCDC130P13994 396 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 ATP2A2P16615 1042 aaKnown RBP13.82□□□□□ -0.2
CCSER1-205ENST00000505073 FAM26DQ5JW98 314 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 ASRGL1Q7L266 308 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 SPATA21Q7Z572 469 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 MRPL10Q7Z7H8 261 aaKnown RBP13.82□□□□□ -0.2
CCSER1-205ENST00000505073 UNC93AQ86WB7 457 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 ADGRF2Q8IZF7 708 aa13.82□□□□□ -0.2
CCSER1-205ENST00000505073 TSEN34Q9BSV6 310 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms