RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 DCUN1D2Q6PH85 259 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 C4orf50Q6ZRC1 276 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 CLEC20AQ6ZU45 233 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 FAM183BPQ6ZVS7 135 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 PAQR9Q6ZVX9 377 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 PEX26Q7Z412 305 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 XYLT1Q86Y38 959 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 SPATA2LQ8IUW3 424 aaPredicted RBP9.84□□□□□ -0.83
TPM3-218ENST00000505010 DCP1BQ8IZD4 617 aaKnown RBP9.84□□□□□ -0.83
TPM3-218ENST00000505010 SLC39A11Q8N1S5 342 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 FIBCD1Q8N539 461 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 SLC35F5Q8WV83 523 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 TMEM169Q96HH4 297 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 IGSF21Q96ID5 467 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 MCEEQ96PE7 176 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 PKMYT1Q99640 499 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 C11orf84Q9BUA3 381 aaPredicted RBP9.84□□□□□ -0.83
TPM3-218ENST00000505010 ZCWPW1Q9H0M4 648 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 LMAN2LQ9H0V9 348 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 TLR9Q9NR96 1032 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 METTL5Q9NRN9 209 aaKnown RBP9.84□□□□□ -0.83
TPM3-218ENST00000505010 TMLHEQ9NVH6 421 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 WDR35Q9P2L0 1181 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 JRKLQ9Y4A0 524 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 HYOU1Q9Y4L1 999 aa9.84□□□□□ -0.83
TPM3-218ENST00000505010 RIF1Q5UIP0 2472 aaKnown RBP9.84□□□□□ -0.83
TPM3-218ENST00000505010 PLXNA3P51805 1871 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 OR6C75A6NL08 312 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 LOC730098B7Z3J9 87 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 PROB1E7EW31 1015 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 C5orf67F2Z3F1 127 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 SPOPO43791 374 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 TBX10O75333 385 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 CPB1P15086 417 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 BDNFP23560 247 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 BMPR1AP36894 532 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 GABRB2P47870 512 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 NDUFV1P49821 464 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 NUBP1P53384 320 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 VCPP55072 806 aaKnown RBP9.83□□□□□ -0.84
TPM3-218ENST00000505010 GSCP56915 257 aaPredicted RBP9.83□□□□□ -0.84
TPM3-218ENST00000505010 ADIGQ0VDE8 80 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 ADAM15Q13444 863 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 RPS6KA1Q15418 735 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 PSMD5Q16401 504 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 USP41Q3LFD5 358 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 MEI1Q5TIA1 1274 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 KIAA1841Q6NSI8 718 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 FAM171BQ6P995 826 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 PRSS55Q6UWB4 352 aaPredicted RBP9.83□□□□□ -0.84
TPM3-218ENST00000505010 TAS1R1Q7RTX1 841 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 SLFN11Q7Z7L1 901 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 PIGZQ86VD9 579 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 LRRTM3Q86VH5 581 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 SIX6OS1Q8N1H7 587 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 FEZF2Q8TBJ5 459 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 STK32AQ8WU08 396 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 RIN2Q8WYP3 895 aaPredicted RBP9.83□□□□□ -0.84
TPM3-218ENST00000505010 TTPALQ9BTX7 342 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 HERC2P3Q9BVR0 1158 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 VN1R3Q9BXE9 311 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 SLC4A5Q9BY07 1137 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 TRIM7Q9C029 511 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 ALG13Q9NP73 1137 aaKnown RBP9.83□□□□□ -0.84
TPM3-218ENST00000505010 CYLDQ9NQC7 956 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 AAASQ9NRG9 546 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 ABI2Q9NYB9 513 aaPredicted RBP9.83□□□□□ -0.84
TPM3-218ENST00000505010 SPG21Q9NZD8 308 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 AMFRQ9UKV5 643 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 PACSIN2Q9UNF0 486 aaPredicted RBP9.83□□□□□ -0.84
TPM3-218ENST00000505010 RWDD3Q9Y3V2 267 aa9.83□□□□□ -0.84
TPM3-218ENST00000505010 TCRBV5S1A1TA0A578 114 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 CARNS1A5YM72 827 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 MYO1FO00160 1098 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 C2CD2LO14523 706 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 GRM6O15303 877 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 LINC01565O15544 149 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 BEST1O76090 585 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 KRT3P12035 628 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 COMTP21964 271 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 GTF2F1P35269 517 aaKnown RBP eCLIP9.82□□□□□ -0.84
TPM3-218ENST00000505010 PPM1AP35813 382 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 ACADSBP45954 432 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 ID4P47928 161 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 GLUD2P49448 558 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 CACNA2D1P54289 1103 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 RPL7AP62424 266 aaKnown RBP9.82□□□□□ -0.84
TPM3-218ENST00000505010 AMPD2Q01433 879 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 ZNF268Q14587 947 aaPredicted RBP9.82□□□□□ -0.84
TPM3-218ENST00000505010 NFE2Q16621 373 aaPredicted RBP9.82□□□□□ -0.84
TPM3-218ENST00000505010 PPP1R15BQ5SWA1 713 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 ANKS3Q6ZW76 656 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 ASCL5Q7RTU5 278 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 NT5DC3Q86UY8 548 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 CPNE8Q86YQ8 564 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 JOSD2Q8TAC2 188 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 PPP2R3CQ969Q6 453 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 MCRS1Q96EZ8 462 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 CAPZA3Q96KX2 299 aa9.82□□□□□ -0.84
TPM3-218ENST00000505010 HSFY1Q96LI6 401 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms