RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 XPO6Q96QU8 1125 aaKnown RBP8.25□□□□□ -1.09
MATR3-210ENST00000504643 CDK5RAP1Q96SZ6 601 aaKnown RBP8.25□□□□□ -1.09
MATR3-210ENST00000504643 B3GNT5Q9BYG0 378 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 FGFBP2Q9BYJ0 223 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 RNF38Q9H0F5 515 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 SLC32A1Q9H598 525 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 ARHGEF4Q9NR80 690 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 TLR8Q9NR97 1041 aaKnown RBP8.25□□□□□ -1.09
MATR3-210ENST00000504643 NXF1Q9UBU9 619 aaKnown RBP8.25□□□□□ -1.09
MATR3-210ENST00000504643 LSM7Q9UK45 103 aaKnown RBP8.25□□□□□ -1.09
MATR3-210ENST00000504643 FAM92AA1XBS5 289 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 TBC1D3BA6NDS4 549 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 PDXKO00764 312 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 CLIC2O15247 247 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 MAPK13O15264 365 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 POLR2DO15514 142 aaKnown RBP8.25□□□□□ -1.09
MATR3-210ENST00000504643 HOXC11O43248 304 aaPredicted RBP8.25□□□□□ -1.09
MATR3-210ENST00000504643 ZNF217O75362 1048 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 HOXD13P35453 343 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 MYL6P60660 151 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 USP46P62068 366 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 SYT12Q8IV01 421 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 CRYBG2Q8N1P7 616 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 CCDC150Q8NCX0 1101 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 PARD3BQ8TEW8 1205 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 IMPG2Q9BZV3 1241 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 FAM124BQ9H5Z6 455 aaPredicted RBP8.25□□□□□ -1.09
MATR3-210ENST00000504643 BCCIPQ9P287 314 aaKnown RBP eCLIP8.25□□□□□ -1.09
MATR3-210ENST00000504643 ZNF510Q9Y2H8 683 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 FRMD4BQ9Y2L6 1034 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 PTPRJQ12913 1337 aa8.25□□□□□ -1.09
MATR3-210ENST00000504643 TMEM8BA6NDV4 472 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 NPC1O15118 1278 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 AP5Z1O43299 807 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 HSP90AA1P07900 732 aaKnown RBP8.24□□□□□ -1.09
MATR3-210ENST00000504643 SLFN14P0C7P3 912 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 ZDHHC11BP0C7U3 371 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 P2RY2P41231 377 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 ME1P48163 572 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 PSEN1P49768 467 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 ZNF132P52740 706 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 NCOA4Q13772 614 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 ANO7Q6IWH7 933 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 KLHDC10Q6PID8 442 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 SHC4Q6S5L8 630 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 HTR3DQ70Z44 454 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 NELFCDQ8IXH7 590 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 ZNF276Q8N554 614 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 EZH1Q92800 747 aaPredicted RBP8.24□□□□□ -1.09
MATR3-210ENST00000504643 CCDC34Q96HJ3 373 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 ZNF518BQ9C0D4 1074 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 XYLT2Q9H1B5 865 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 CYP3A43Q9HB55 503 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 PNPLA8Q9NP80 782 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 SPHK2Q9NRA0 654 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 EXOC1Q9NV70 894 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 STARD13Q9Y3M8 1113 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 DENND4CQ5VZ89 1909 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 C4orf47A7E2U8 309 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 UPK3BL1B0FP48 263 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 UPK3BL2E5RIL1 263 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 CALUO43852 315 aaPredicted RBP8.24□□□□□ -1.09
MATR3-210ENST00000504643 CLSTN1O94985 981 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 KLF8O95600 359 aaPredicted RBP8.24□□□□□ -1.09
MATR3-210ENST00000504643 KCNA4P22459 653 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 ATP5C1P36542 298 aaKnown RBP8.24□□□□□ -1.09
MATR3-210ENST00000504643 DHPSP49366 369 aaPredicted RBP8.24□□□□□ -1.09
MATR3-210ENST00000504643 SEC13P55735 322 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 IL17RCQ8NAC3 791 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 TXNDC5Q8NBS9 432 aaKnown RBP8.24□□□□□ -1.09
MATR3-210ENST00000504643 CSNK1G1Q9HCP0 422 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 SLC39A2Q9NP94 309 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 DMAC2Q9NW81 257 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 SMPD4Q9NXE4 827 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 PCDHA5Q9Y5H7 936 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 DCHS1Q96JQ0 3298 aa8.24□□□□□ -1.09
MATR3-210ENST00000504643 GREB1Q4ZG55 1949 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 GFRA2O00451 464 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 COCHO43405 550 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 HCRTO43612 131 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 AP1G2O75843 785 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 C4BPAP04003 597 aaKnown RBP8.23□□□□□ -1.09
MATR3-210ENST00000504643 ZSCAN22P10073 491 aaPredicted RBP8.23□□□□□ -1.09
MATR3-210ENST00000504643 RPL13P26373 211 aaKnown RBP8.23□□□□□ -1.09
MATR3-210ENST00000504643 TIE1P35590 1138 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 KIR2DL1P43626 348 aaPredicted RBP8.23□□□□□ -1.09
MATR3-210ENST00000504643 PLA2G4AP47712 749 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 NOVA1P51513 510 aaKnown RBP8.23□□□□□ -1.09
MATR3-210ENST00000504643 SLC5A3P53794 718 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 GAB4Q2WGN9 574 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 LY6G5CQ5SRR4 150 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 RESP18Q5W5W9 173 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 FAM35AQ86V20 835 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 PGBD3Q8N328 593 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 CCDC33Q8N5R6 958 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 ALLCQ8N6M5 410 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 ZNF516Q92618 1163 aa8.23□□□□□ -1.09
MATR3-210ENST00000504643 CHORDC1Q9UHD1 332 aaPredicted RBP8.23□□□□□ -1.09
MATR3-210ENST00000504643 ZNF638Q14966 1978 aaKnown RBP8.23□□□□□ -1.09
MATR3-210ENST00000504643 RALGAPA1Q6GYQ0 2036 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms