RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 AFF4Q9UHB7 1163 aaKnown RBP10.75□□□□□ -0.69
USP17L28-201ENST00000504543 CD207Q9UJ71 328 aa10.75□□□□□ -0.69
USP17L28-201ENST00000504543 POLIQ9UNA4 740 aa10.75□□□□□ -0.69
USP17L28-201ENST00000504543 I3L4J1 428 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 C2CD2LO14523 706 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 TGM5O43548 720 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 TBX10O75333 385 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 CALCAP01258 141 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 COMTP21964 271 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 WARSP23381 471 aaKnown RBP10.74□□□□□ -0.69
USP17L28-201ENST00000504543 RRM1P23921 792 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 BRD2P25440 801 aaKnown RBP10.74□□□□□ -0.69
USP17L28-201ENST00000504543 PCSK1P29120 753 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 OR1D2P34982 312 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 DNA2P51530 1060 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 RAD23BP54727 409 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 SMAD4Q13485 552 aaKnown RBP10.74□□□□□ -0.69
USP17L28-201ENST00000504543 MESDQ14696 234 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 SKIV2LQ15477 1246 aaKnown RBP10.74□□□□□ -0.69
USP17L28-201ENST00000504543 SOWAHAQ2M3V2 549 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 BEND6Q5SZJ8 279 aaPredicted RBP10.74□□□□□ -0.69
USP17L28-201ENST00000504543 SYCE2Q6PIF2 218 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 RBM23Q86U06 439 aaKnown RBP10.74□□□□□ -0.69
USP17L28-201ENST00000504543 CPA5Q8WXQ8 436 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 SUSD6Q92537 303 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 B3GALT6Q96L58 329 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 NECTIN4Q96NY8 510 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 C11orf70Q9BRQ4 267 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 SLITRK6Q9H5Y7 841 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 IGFLR1Q9H665 355 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 SMYD3Q9H7B4 428 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 FAM53CQ9NYF3 392 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 NXF1Q9UBU9 619 aaKnown RBP10.74□□□□□ -0.69
USP17L28-201ENST00000504543 ANAPC7Q9UJX3 599 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 KIAA1257Q9ULG3 409 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 STRIP2Q9ULQ0 834 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 PCDHA3Q9Y5H8 950 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 SNX9Q9Y5X1 595 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 CDY1Q9Y6F8 540 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 PLXNA3P51805 1871 aa10.74□□□□□ -0.69
USP17L28-201ENST00000504543 LINC01565O15544 149 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 SPOPO43791 374 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 ZMYND10O75800 440 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 CFHP08603 1231 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 WEE2P0C1S8 567 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 MTHFRP42898 656 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 PEX5P50542 639 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 ROR1Q01973 937 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 STILQ15468 1287 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 MAPRE1Q15691 268 aaKnown RBP10.73□□□□□ -0.69
USP17L28-201ENST00000504543 NFE2Q16621 373 aaPredicted RBP10.73□□□□□ -0.69
USP17L28-201ENST00000504543 LONRF2Q1L5Z9 754 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 SEL1L2Q5TEA6 688 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 WSCD1Q658N2 575 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 RSPO2Q6UXX9 243 aaPredicted RBP10.73□□□□□ -0.69
USP17L28-201ENST00000504543 PASD1Q8IV76 773 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 DCP1BQ8IZD4 617 aaKnown RBP10.73□□□□□ -0.69
USP17L28-201ENST00000504543 SLC4A11Q8NBS3 891 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 KREMEN2Q8NCW0 462 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 WHAMMQ8TF30 809 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 PPM1EQ8WY54 764 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 ALG3Q92685 438 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 CEP295NLQ96MC4 621 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 ASB2Q96Q27 587 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 LRRC1Q9BTT6 524 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 ZCWPW1Q9H0M4 648 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 SDCBP2Q9H190 292 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 ADAM7Q9H2U9 754 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 PARVAQ9NVD7 372 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 PRKAG3Q9UGI9 489 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 BARX2Q9UMQ3 279 aaPredicted RBP10.73□□□□□ -0.69
USP17L28-201ENST00000504543 L1RE1Q9UN81 338 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 GOLGA6L10A0A0M3HER8 536 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 TCRBV5S1A1TA0A578 114 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 GRXCR2A6NFK2 248 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 MYO1FO00160 1098 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 MBTPS2O43462 519 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 PSTPIP1O43586 416 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 PROSCO94903 275 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 EPCAMP16422 314 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 KCNA5P22460 613 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 CA8P35219 290 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 RAP1GAPP47736 663 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 DLX2Q07687 328 aaPredicted RBP10.73□□□□□ -0.69
USP17L28-201ENST00000504543 MAMLD1Q13495 774 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 SMAD2Q15796 467 aaKnown RBP10.73□□□□□ -0.69
USP17L28-201ENST00000504543 CES5AQ6NT32 575 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 MMS22LQ6ZRQ5 1243 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 GPR149Q86SP6 731 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 UNC93AQ86WB7 457 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 ADGRF2Q8IZF7 708 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 EIF1ADQ8N9N8 165 aaKnown RBP10.73□□□□□ -0.69
USP17L28-201ENST00000504543 C3orf20Q8ND61 904 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 C1orf131Q8NDD1 294 aaKnown RBP10.73□□□□□ -0.69
USP17L28-201ENST00000504543 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.73□□□□□ -0.69
USP17L28-201ENST00000504543 SPPL2BQ8TCT7 592 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 KBTBD7Q8WVZ9 684 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.73□□□□□ -0.69
USP17L28-201ENST00000504543 TMEM176AQ96HP8 235 aa10.73□□□□□ -0.69
USP17L28-201ENST00000504543 FUBP3Q96I24 572 aaKnown RBP eCLIP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms