RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 LURAP1LQ8IV03 231 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 THNSL1Q8IYQ7 743 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 CCDC170Q8IYT3 715 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 CNTROBQ8N137 903 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 BCL6BQ8N143 479 aaPredicted RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 NUP93Q8N1F7 819 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 AGGF1Q8N302 714 aaeCLIP2.09□□□□□ -2.07
UBR4-217ENST00000497018 TMEM130Q8N3G9 435 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 NAT16Q8N8M0 369 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 ARRDC4Q8NCT1 418 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 HIPK4Q8NE63 616 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 MOSPD2Q8NHP6 518 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 NEDD1Q8NHV4 660 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 NFKBIDQ8NI38 313 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 GDAP1Q8TB36 358 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 METTL6Q8TCB7 284 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 CPT1CQ8TCG5 803 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 FNIP1Q8TF40 1166 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 BCL7CQ8WUZ0 217 aaPredicted RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 CEP95Q96GE4 821 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 CALML4Q96GE6 196 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 FAM46AQ96IP4 442 aaKnown RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 NOX5Q96PH1 765 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 TRAPPC9Q96Q05 1148 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 NACC1Q96RE7 527 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 UIMC1Q96RL1 719 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 FNBP1Q96RU3 617 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 PIGSQ96S52 555 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 VPS16Q9H269 839 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 TAF1DQ9H5J8 278 aaPredicted RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 MANSC1Q9H8J5 431 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 NOD2Q9HC29 1040 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 PDE7BQ9NP56 450 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 HEYLQ9NQ87 328 aaPredicted RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 A1CFQ9NQ94 594 aaKnown RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 EIF2B3Q9NR50 452 aaKnown RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 USP40Q9NVE5 1235 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 HPF1Q9NWY4 346 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 SIDT1Q9NXL6 827 aaKnown RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 NDUFAF4Q9P032 175 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 KCMF1Q9P0J7 381 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 ARHGAP20Q9P2F6 1191 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 FTSJ1Q9UET6 329 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 TRPS1Q9UHF7 1281 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 GTF3C4Q9UKN8 822 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 ZDHHC8Q9ULC8 765 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 ZMYND8Q9ULU4 1186 aaPredicted RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 RWDD3Q9Y3V2 267 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 MTF2Q9Y483 593 aaPredicted RBP2.09□□□□□ -2.07
UBR4-217ENST00000497018 PCDHB4Q9Y5E5 795 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.09□□□□□ -2.07
UBR4-217ENST00000497018 FAM169AQ9Y6X4 670 aa2.09□□□□□ -2.07
UBR4-217ENST00000497018 UTRNP46939 3433 aa2.09□□□□□ -2.08
UBR4-217ENST00000497018 PIK3C2AO00443 1686 aa2.09□□□□□ -2.08
UBR4-217ENST00000497018 PKD1L3Q7Z443 1732 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 NALCNQ8IZF0 1738 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 RPRD2Q5VT52 1461 aaKnown RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 KIDINS220Q9ULH0 1771 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 CHD2O14647 1828 aaKnown RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 SLIT2O94813 1529 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 A0A0A0MRY4 1105 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 FAM95CA0A1B0GW59 222 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 A0A1W2PQM1 296 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 SAC3D1A6NKF1 404 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 GNAT3A8MTJ3 354 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 E7EVH7 732 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 F8W031 263 aaPredicted RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 STX16-NPEPL1H3BU86 382 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 STX16O14662 325 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 GNB5O14775 395 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 HGSO14964 777 aaPredicted RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 SGSM2O43147 1006 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 KLK10O43240 276 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 AKR1B10O60218 316 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 TBC1D4O60343 1298 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 SYNCRIPO60506 623 aaKnown RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 CUTAO60888 179 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 SOCS5O75159 536 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 TBCAO75347 108 aaKnown RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 ENTPD3O75355 529 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 GPR32O75388 356 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 B3GALNT1O75752 331 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 TSPAN9O75954 239 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 USP1O94782 785 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 LY86O95711 162 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ESR1P03372 595 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 CHGBP05060 677 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ATP5BP06576 529 aaKnown RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 LTA4HP09960 611 aaKnown RBP2.08□□□□□ -2.08
UBR4-217ENST00000497018 SBK3P0C264 359 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 FAM87AP0C7U9 286 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 MSL3P1P0C860 447 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 VSIG8P0DPA2 414 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ARP10275 920 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 GLB1P16278 677 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 KCNA2P16389 499 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 PTPN2P17706 415 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 FPR1P21462 350 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 PTGS1P23219 599 aa2.08□□□□□ -2.08
UBR4-217ENST00000497018 ADSLP30566 484 aaPredicted RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms