RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ADAM22Q9P0K1 906 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 SCML2Q9UQR0 700 aa22.89■■□□□ 1.26
C9orf3-222ENST00000496567 GREB1Q4ZG55 1949 aa22.89■■□□□ 1.25
C9orf3-222ENST00000496567 CALB1P05937 261 aa22.89■■□□□ 1.25
C9orf3-222ENST00000496567 C1QBPQ07021 282 aaKnown RBP22.89■■□□□ 1.25
C9orf3-222ENST00000496567 CCDC122Q5T0U0 273 aa22.89■■□□□ 1.25
C9orf3-222ENST00000496567 CYP4A22Q5TCH4 519 aa22.89■■□□□ 1.25
C9orf3-222ENST00000496567 PM20D1Q6GTS8 502 aa22.89■■□□□ 1.25
C9orf3-222ENST00000496567 ZDHHC17Q8IUH5 632 aa22.89■■□□□ 1.25
C9orf3-222ENST00000496567 OVCA2Q8WZ82 227 aa22.89■■□□□ 1.25
C9orf3-222ENST00000496567 FBXO32Q969P5 355 aa22.89■■□□□ 1.25
C9orf3-222ENST00000496567 VCPIP1Q96JH7 1222 aa22.89■■□□□ 1.25
C9orf3-222ENST00000496567 MSLNLQ96KJ4 702 aa22.89■■□□□ 1.25
C9orf3-222ENST00000496567 ULBP1Q9BZM6 244 aa22.89■■□□□ 1.25
C9orf3-222ENST00000496567 ISCUQ9H1K1 167 aa22.89■■□□□ 1.25
C9orf3-222ENST00000496567 TAS2R14Q9NYV8 317 aa22.89■■□□□ 1.25
C9orf3-222ENST00000496567 DNMT3BQ9UBC3 853 aaKnown RBP22.89■■□□□ 1.25
C9orf3-222ENST00000496567 STRIP2Q9ULQ0 834 aa22.89■■□□□ 1.25
C9orf3-222ENST00000496567 SOWAHDA6NJG2 315 aa22.88■■□□□ 1.25
C9orf3-222ENST00000496567 PIK3R2O00459 728 aa22.88■■□□□ 1.25
C9orf3-222ENST00000496567 SART1O43290 800 aaKnown RBP22.88■■□□□ 1.25
C9orf3-222ENST00000496567 GABBR2O75899 941 aa22.88■■□□□ 1.25
C9orf3-222ENST00000496567 FTLP02792 175 aaPredicted RBP22.88■■□□□ 1.25
C9orf3-222ENST00000496567 USP17L7P0C7H9 530 aa22.88■■□□□ 1.25
C9orf3-222ENST00000496567 PPP3CCP48454 512 aa22.88■■□□□ 1.25
C9orf3-222ENST00000496567 TAF10Q12962 218 aa22.88■■□□□ 1.25
C9orf3-222ENST00000496567 PABPC1LQ4VXU2 614 aaKnown RBP22.88■■□□□ 1.25
C9orf3-222ENST00000496567 MMS22LQ6ZRQ5 1243 aa22.88■■□□□ 1.25
C9orf3-222ENST00000496567 SCUBE3Q8IX30 993 aa22.88■■□□□ 1.25
C9orf3-222ENST00000496567 PDZD8Q8NEN9 1154 aa22.88■■□□□ 1.25
C9orf3-222ENST00000496567 C11orf70Q9BRQ4 267 aa22.88■■□□□ 1.25
C9orf3-222ENST00000496567 APOL5Q9BWW9 433 aa22.88■■□□□ 1.25
C9orf3-222ENST00000496567 S1PR5Q9H228 398 aa22.88■■□□□ 1.25
C9orf3-222ENST00000496567 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.87■■□□□ 1.25
C9orf3-222ENST00000496567 ERBB2P04626 1255 aa22.87■■□□□ 1.25
C9orf3-222ENST00000496567 RHOP08100 348 aa22.87■■□□□ 1.25
C9orf3-222ENST00000496567 EPHA5P54756 1037 aa22.87■■□□□ 1.25
C9orf3-222ENST00000496567 PDZD4Q76G19 769 aaPredicted RBP22.87■■□□□ 1.25
C9orf3-222ENST00000496567 MON1BQ7L1V2 547 aa22.87■■□□□ 1.25
C9orf3-222ENST00000496567 GRASPQ7Z6J2 395 aaPredicted RBP22.87■■□□□ 1.25
C9orf3-222ENST00000496567 TMC8Q8IU68 726 aa22.87■■□□□ 1.25
C9orf3-222ENST00000496567 MCOLN2Q8IZK6 566 aa22.87■■□□□ 1.25
C9orf3-222ENST00000496567 IRGQQ8WZA9 623 aa22.87■■□□□ 1.25
C9orf3-222ENST00000496567 TRIM11Q96F44 468 aa22.87■■□□□ 1.25
C9orf3-222ENST00000496567 GCNAQ96QF7 691 aa22.87■■□□□ 1.25
C9orf3-222ENST00000496567 LRRC3Q9BY71 257 aa22.87■■□□□ 1.25
C9orf3-222ENST00000496567 UBE2ZQ9H832 354 aaPredicted RBP22.87■■□□□ 1.25
C9orf3-222ENST00000496567 SPTLC3Q9NUV7 552 aa22.87■■□□□ 1.25
C9orf3-222ENST00000496567 HCFC1R1Q9NWW0 138 aa22.87■■□□□ 1.25
C9orf3-222ENST00000496567 WDR35Q9P2L0 1181 aa22.87■■□□□ 1.25
C9orf3-222ENST00000496567 TJP2Q9UDY2 1190 aa22.87■■□□□ 1.25
C9orf3-222ENST00000496567 EPN1Q9Y6I3 576 aaPredicted RBP22.87■■□□□ 1.25
C9orf3-222ENST00000496567 FAM170AA1A519 330 aa22.86■■□□□ 1.25
C9orf3-222ENST00000496567 PAPSS1O43252 624 aaPredicted RBP22.86■■□□□ 1.25
C9orf3-222ENST00000496567 IPO7O95373 1038 aaKnown RBP22.86■■□□□ 1.25
C9orf3-222ENST00000496567 CDC25CP30307 473 aa22.86■■□□□ 1.25
C9orf3-222ENST00000496567 DAOAP59103 153 aa22.86■■□□□ 1.25
C9orf3-222ENST00000496567 MRPS5P82675 430 aaKnown RBP22.86■■□□□ 1.25
C9orf3-222ENST00000496567 ZNF268Q14587 947 aaPredicted RBP22.86■■□□□ 1.25
C9orf3-222ENST00000496567 ATAT1Q5SQI0 421 aa22.86■■□□□ 1.25
C9orf3-222ENST00000496567 C10orf76Q5T2E6 689 aa22.86■■□□□ 1.25
C9orf3-222ENST00000496567 OR6B2Q6IFH4 312 aa22.86■■□□□ 1.25
C9orf3-222ENST00000496567 MON1AQ86VX9 555 aa22.86■■□□□ 1.25
C9orf3-222ENST00000496567 HS6ST3Q8IZP7 471 aa22.86■■□□□ 1.25
C9orf3-222ENST00000496567 ARHGAP18Q8N392 663 aa22.86■■□□□ 1.25
C9orf3-222ENST00000496567 HLA-CQ95604 372 aa22.86■■□□□ 1.25
C9orf3-222ENST00000496567 RIPOR3Q96MK2 946 aa22.86■■□□□ 1.25
C9orf3-222ENST00000496567 ZNF334Q9HCZ1 680 aaPredicted RBP22.86■■□□□ 1.25
C9orf3-222ENST00000496567 AVENQ9NQS1 362 aaPredicted RBP22.86■■□□□ 1.25
C9orf3-222ENST00000496567 TLR8Q9NR97 1041 aaKnown RBP22.86■■□□□ 1.25
C9orf3-222ENST00000496567 TRPM5Q9NZQ8 1165 aa22.86■■□□□ 1.25
C9orf3-222ENST00000496567 CD207Q9UJ71 328 aa22.86■■□□□ 1.25
C9orf3-222ENST00000496567 NENFQ9UMX5 172 aa22.86■■□□□ 1.25
C9orf3-222ENST00000496567 NCANO14594 1321 aa22.86■■□□□ 1.25
C9orf3-222ENST00000496567 ZNF638Q14966 1978 aaKnown RBP22.85■■□□□ 1.25
C9orf3-222ENST00000496567 EIF3CLB5ME19 914 aaKnown RBP22.85■■□□□ 1.25
C9orf3-222ENST00000496567 ZNF197O14709 1029 aa22.85■■□□□ 1.25
C9orf3-222ENST00000496567 NDUFA10O95299 355 aa22.85■■□□□ 1.25
C9orf3-222ENST00000496567 MYL4P12829 197 aa22.85■■□□□ 1.25
C9orf3-222ENST00000496567 PSEN1P49768 467 aa22.85■■□□□ 1.25
C9orf3-222ENST00000496567 PTP4A2Q12974 167 aa22.85■■□□□ 1.25
C9orf3-222ENST00000496567 SPA17Q15506 151 aa22.85■■□□□ 1.25
C9orf3-222ENST00000496567 TOGARAM2Q6ZUX3 1019 aa22.85■■□□□ 1.25
C9orf3-222ENST00000496567 XYLT1Q86Y38 959 aa22.85■■□□□ 1.25
C9orf3-222ENST00000496567 SMRP1Q8NCR6 262 aa22.85■■□□□ 1.25
C9orf3-222ENST00000496567 MAFAQ8NHW3 353 aaPredicted RBP22.85■■□□□ 1.25
C9orf3-222ENST00000496567 GOLGA1Q92805 767 aa22.85■■□□□ 1.25
C9orf3-222ENST00000496567 EIF3CQ99613 913 aaKnown RBP22.85■■□□□ 1.25
C9orf3-222ENST00000496567 COG5Q9UP83 839 aa22.85■■□□□ 1.25
C9orf3-222ENST00000496567 REV3LO60673 3130 aa22.85■■□□□ 1.25
C9orf3-222ENST00000496567 ARHGAP6O43182 974 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 LCA5LO95447 670 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 F11P03951 625 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 MYBL1P10243 752 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 GABRR2P28476 465 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 MTHFRP42898 656 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 GSCP56915 257 aaPredicted RBP22.84■■□□□ 1.25
C9orf3-222ENST00000496567 C2CD6Q53TS8 623 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 RAD9BQ6WBX8 426 aa22.84■■□□□ 1.25
C9orf3-222ENST00000496567 FAM183BPQ6ZVS7 135 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms