RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 C16orf52Q8NHV5 167 aa2.59□□□□□ -1.99
PTPN12-212ENST00000494248 RAB24Q969Q5 203 aa2.59□□□□□ -1.99
PTPN12-212ENST00000494248 FAM136AQ96C01 138 aa2.59□□□□□ -1.99
PTPN12-212ENST00000494248 CHMP4CQ96CF2 233 aa2.59□□□□□ -1.99
PTPN12-212ENST00000494248 ASB2Q96Q27 587 aa2.59□□□□□ -1.99
PTPN12-212ENST00000494248 MYCBPQ99417 103 aaPredicted RBP2.59□□□□□ -1.99
PTPN12-212ENST00000494248 ELAC2Q9BQ52 826 aaKnown RBP2.59□□□□□ -1.99
PTPN12-212ENST00000494248 CNPPD1Q9BV87 410 aa2.59□□□□□ -1.99
PTPN12-212ENST00000494248 RTFDC1Q9BY42 306 aaPredicted RBP2.59□□□□□ -1.99
PTPN12-212ENST00000494248 SEZ6LQ9BYH1 1024 aa2.59□□□□□ -1.99
PTPN12-212ENST00000494248 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.59□□□□□ -1.992e-6■■■□□ 16.2
PTPN12-212ENST00000494248 SLCO5A1Q9H2Y9 848 aa2.59□□□□□ -1.99
PTPN12-212ENST00000494248 PRDM11Q9NQV5 511 aa2.59□□□□□ -1.99
PTPN12-212ENST00000494248 AASDHPPTQ9NRN7 309 aa2.59□□□□□ -1.99
PTPN12-212ENST00000494248 RLIMQ9NVW2 624 aa2.59□□□□□ -1.99
PTPN12-212ENST00000494248 SIDT1Q9NXL6 827 aaKnown RBP2.59□□□□□ -1.99
PTPN12-212ENST00000494248 OBP2AQ9NY56 170 aa2.59□□□□□ -1.99
PTPN12-212ENST00000494248 C9orf78Q9NZ63 289 aaPredicted RBP2.59□□□□□ -1.99
PTPN12-212ENST00000494248 CFAP97Q9P2B7 532 aa2.59□□□□□ -1.99
PTPN12-212ENST00000494248 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.59□□□□□ -1.99
PTPN12-212ENST00000494248 SLC45A2Q9UMX9 530 aa2.59□□□□□ -1.99
PTPN12-212ENST00000494248 KLHL33A6NCF5 533 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 PABPN1LA6NDY0 278 aaKnown RBP2.58□□□□□ -2
PTPN12-212ENST00000494248 C4orf47A7E2U8 309 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 H7C1Q1 480 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 ADAM10O14672 748 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 PIP5K1CO60331 668 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 TLR5O60602 858 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 NDUFS2O75306 463 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 HMMRO75330 724 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 KATNA1O75449 491 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 PRKD3O94806 890 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 SLC5A1P13866 664 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 ATP5F1P24539 256 aaPredicted RBP2.58□□□□□ -2
PTPN12-212ENST00000494248 PEX19P40855 299 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 MMP14P50281 582 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 PDE1AP54750 535 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 HILS1P60008 231 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 NUCB1Q02818 461 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 NEXNQ0ZGT2 675 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 TBX2Q13207 712 aaPredicted RBP2.58□□□□□ -2
PTPN12-212ENST00000494248 KLF1Q13351 362 aaPredicted RBP2.58□□□□□ -2
PTPN12-212ENST00000494248 BIRC3Q13489 604 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 HABP2Q14520 560 aaPredicted RBP2.58□□□□□ -2
PTPN12-212ENST00000494248 ACAP2Q15057 778 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 TOMM20Q15388 145 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 RBM20Q5T481 1227 aaKnown RBP2.58□□□□□ -2
PTPN12-212ENST00000494248 JAKMIP3Q5VZ66 844 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 CXorf57Q6NSI4 855 aaKnown RBP2.58□□□□□ -2
PTPN12-212ENST00000494248 MZT2BQ6NZ67 158 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 TTC7BQ86TV6 843 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 RPAINQ86UA6 219 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 DTX2Q86UW9 622 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 ZBTB46Q86UZ6 589 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 LMNTD2Q8IXW0 634 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 NDUFAF2Q8N183 169 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 CLASRPQ8N2M8 674 aaKnown RBP2.58□□□□□ -2
PTPN12-212ENST00000494248 AFAP1L2Q8N4X5 818 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 NKAIN3Q8N8D7 197 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 PNLDC1Q8NA58 520 aaKnown RBP2.58□□□□□ -2
PTPN12-212ENST00000494248 VPS37AQ8NEZ2 397 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 NR4A3Q92570 626 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 TRIM44Q96DX7 344 aaPredicted RBP2.58□□□□□ -2
PTPN12-212ENST00000494248 HOOK2Q96ED9 719 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 CDK5RAP3Q96JB5 506 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 CDHR1Q96JP9 859 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 MRGPRX4Q96LA9 322 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 TBATAQ96M53 351 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 MACROD1Q9BQ69 325 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 CHMP4BQ9H444 224 aaKnown RBP2.58□□□□□ -2
PTPN12-212ENST00000494248 RIC8AQ9NPQ8 531 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 PLCB1Q9NQ66 1216 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 MKS1Q9NXB0 559 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 DLL3Q9NYJ7 618 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 ZNF180Q9UJW8 692 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 CCNL1Q9UK58 526 aaPredicted RBP2.58□□□□□ -2
PTPN12-212ENST00000494248 ISY1Q9ULR0 285 aaKnown RBP2.58□□□□□ -2
PTPN12-212ENST00000494248 NOB1Q9ULX3 412 aaKnown RBP2.58□□□□□ -2
PTPN12-212ENST00000494248 LUC7L2Q9Y383 392 aaKnown RBP2.58□□□□□ -2
PTPN12-212ENST00000494248 SPEF1Q9Y4P9 236 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 IPPQ9Y573 584 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 MRFAP1Q9Y605 127 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 WDR17Q8IZU2 1322 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 SYNRGQ9UMZ2 1314 aa2.58□□□□□ -2
PTPN12-212ENST00000494248 VSTM5A8MXK1 200 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 FCHO1O14526 889 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 SLC16A3O15427 465 aaKnown RBP2.57□□□□□ -2
PTPN12-212ENST00000494248 GPR39O43194 453 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 VPS4BO75351 444 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 EYA4O95677 639 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 GJB1P08034 283 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 TMEM191BP0C7N4 346 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 HOXD9P28356 352 aaPredicted RBP2.57□□□□□ -2
PTPN12-212ENST00000494248 TSPAN7P41732 249 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 KCNJ5P48544 419 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 CCT5P48643 541 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 PSMC1P62191 440 aaKnown RBP2.57□□□□□ -2
PTPN12-212ENST00000494248 TLE1Q04724 770 aa2.57□□□□□ -2
PTPN12-212ENST00000494248 SRSF1Q07955 248 aaKnown RBP eCLIP2.57□□□□□ -2
PTPN12-212ENST00000494248 ITKQ08881 620 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms