RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 EPHB6O15197 1021 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 CYP26A1O43174 497 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 ABL1P00519 1130 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 PAEPP09466 180 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 VDRP11473 427 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 SRFP11831 508 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 KRT5P13647 590 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 YWHAQP27348 245 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 ZNF165P49910 485 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 PTPN5P54829 565 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 PDE4CQ08493 712 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 SIGLEC14Q08ET2 396 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 MON1AQ86VX9 555 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 CMTM8Q8IZV2 173 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 ARL14EPQ8N8R7 260 aaPredicted RBP12.31□□□□□ -0.44
UBA3-211ENST00000493957 SHC3Q92529 594 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 USP13Q92995 863 aaPredicted RBP12.31□□□□□ -0.44
UBA3-211ENST00000493957 FBXO32Q969P5 355 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 NXPE3Q969Y0 559 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 ZFYVE19Q96K21 471 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 GPR88Q9GZN0 384 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 GANQ9H2C0 597 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 CBX8Q9HC52 389 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 CHORDC1Q9UHD1 332 aaPredicted RBP12.31□□□□□ -0.44
UBA3-211ENST00000493957 DNAJC12Q9UKB3 198 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 CA14Q9ULX7 337 aa12.31□□□□□ -0.44
UBA3-211ENST00000493957 KIAA1549LQ6ZVL6 1849 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 FAM92AA1XBS5 289 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 KRBA1A5PL33 1030 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 LGALS16A8MUM7 142 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 RTN3O95197 1032 aaPredicted RBP12.3□□□□□ -0.44
UBA3-211ENST00000493957 TRIM21P19474 475 aaKnown RBP12.3□□□□□ -0.44
UBA3-211ENST00000493957 USP8P40818 1118 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 MFAP3P55082 362 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 ZXDBP98169 803 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 PKDCCQ504Y2 493 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 KLHDC7AQ5VTJ3 777 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 HFE2Q6ZVN8 426 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 LUZP1Q86V48 1076 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 PIGZQ86VD9 579 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 UBALD2Q8IYN6 164 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 ANKRD52Q8NB46 1076 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 NDRG1Q92597 394 aaKnown RBP12.3□□□□□ -0.44
UBA3-211ENST00000493957 NAT10Q9H0A0 1025 aaKnown RBP12.3□□□□□ -0.44
UBA3-211ENST00000493957 RNF38Q9H0F5 515 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 NMUR1Q9HB89 426 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 OSER1Q9NX31 292 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 TRPM5Q9NZQ8 1165 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.3□□□□□ -0.44
UBA3-211ENST00000493957 SIK3Q9Y2K2 1263 aa12.3□□□□□ -0.44
UBA3-211ENST00000493957 TRAV19A0A0A6YYK7 116 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 M0QYV0 167 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 FOXN3O00409 490 aaPredicted RBP12.29□□□□□ -0.44
UBA3-211ENST00000493957 PIK3R2O00459 728 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 SCAMP3O14828 347 aaKnown RBP12.29□□□□□ -0.44
UBA3-211ENST00000493957 LETM1O95202 739 aaPredicted RBP12.29□□□□□ -0.44
UBA3-211ENST00000493957 OAS1P00973 400 aaKnown RBP12.29□□□□□ -0.44
UBA3-211ENST00000493957 ZDHHC11BP0C7U3 371 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 DDX6P26196 483 aaKnown RBP eCLIP12.29□□□□□ -0.44
UBA3-211ENST00000493957 GDI1P31150 447 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 RGS7P49802 495 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 KIF11P52732 1056 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 BCAT1P54687 386 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 BST2Q10589 180 aaKnown RBP12.29□□□□□ -0.44
UBA3-211ENST00000493957 RAPGEF1Q13905 1077 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 SYCP1Q15431 976 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 SKOR2Q2VWA4 1001 aaPredicted RBP12.29□□□□□ -0.44
UBA3-211ENST00000493957 DENND1BQ6P3S1 775 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 LCLAT1Q6UWP7 414 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 ENOSF1Q7L5Y1 443 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 SCD5Q86SK9 330 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 TTC16Q8NEE8 873 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 SECISBP2LQ93073 1101 aaKnown RBP12.29□□□□□ -0.44
UBA3-211ENST00000493957 SLITRK1Q96PX8 696 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 LRFN3Q9BTN0 628 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 NAA15Q9BXJ9 866 aaKnown RBP12.29□□□□□ -0.44
UBA3-211ENST00000493957 DNAI2Q9GZS0 605 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 CCSER2Q9H7U1 834 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 SLC2A4RGQ9NR83 387 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 SMPD4Q9NXE4 827 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 NUDT5Q9UKK9 219 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 FBXL21Q9UKT6 434 aa12.29□□□□□ -0.44
UBA3-211ENST00000493957 A0A1W2PQH9 124 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 FAM170AA1A519 330 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 LRRC10BA6NIK2 292 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 ARNTLO00327 626 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 DPYSL4O14531 572 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 XPO1O14980 1071 aaKnown RBP12.28□□□□□ -0.44
UBA3-211ENST00000493957 MDM4O15151 490 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 TEX33O43247 280 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 COCHO43405 550 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 THAP12O43422 761 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 GPR37L1O60883 481 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 OLFM2O95897 454 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 CKMP06732 381 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 USP17L7P0C7H9 530 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 UCHL3P15374 230 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 PSMC3P17980 439 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 HDCP19113 662 aa12.28□□□□□ -0.44
UBA3-211ENST00000493957 CDK11BP21127 795 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms