RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 EFHC1Q5JVL4 640 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 UBAP2Q5T6F2 1119 aaKnown RBP11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 TTC19Q6DKK2 380 aaPredicted RBP11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 GDF6Q6KF10 455 aaPredicted RBP11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 CXCL17Q6UXB2 119 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 CENPUQ71F23 418 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 TMEM86AQ8N2M4 240 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 B3GALNT2Q8NCR0 500 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 PRCCQ92733 491 aaPredicted RBP11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 FAF2Q96CS3 445 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 PRDM16Q9HAZ2 1276 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 ST3GAL5Q9UNP4 418 aa11.28□□□□□ -0.6
PHACTR4-204ENST00000493669 A0A087WUV0 522 aaPredicted RBP11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 GABRDO14764 452 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 TRAPPC3O43617 180 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 GABBR2O75899 941 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 TOMM70O94826 608 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 FAM107AO95990 144 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 PDGFRBP09619 1106 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 ZSCAN5DPP0CG00 497 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 CCDC130P13994 396 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 PECAM1P16284 738 aaPredicted RBP11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 PAX3P23760 479 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 LMO2P25791 158 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 CST5P28325 142 aaPredicted RBP11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 ADORA2BP29275 332 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 RAB27AP51159 221 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 TAF5Q15542 800 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 STRADAQ7RTN6 431 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 SCUBE3Q8IX30 993 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 P3H4Q92791 437 aa11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 NGRNQ9NPE2 291 aaKnown RBP11.27□□□□□ -0.6
PHACTR4-204ENST00000493669 PIK3R2O00459 728 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 EBAG9O00559 213 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 ALOX15BO15296 676 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 ADAMTS4O75173 837 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 CDH16O75309 829 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 GRAP2O75791 330 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 IFNB1P01574 187 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 RBP3P10745 1247 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 ROR1Q01973 937 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 SH3PXD2AQ5TCZ1 1133 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 B4GALNT4Q76KP1 1039 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 MRPL10Q7Z7H8 261 aaKnown RBP11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 UHMK1Q8TAS1 419 aaKnown RBP11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 SPATA18Q8TC71 538 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 SLC2A14Q8TDB8 520 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 KCTD13Q8WZ19 329 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 DUSP16Q9BY84 665 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 FAM107BQ9H098 131 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 TSPYL2Q9H2G4 693 aaPredicted RBP11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 GOLGA2P5Q9HBQ8 144 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 PCDH18Q9HCL0 1135 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 GMNCA6NCL1 334 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 CYB561D2O14569 222 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 ETS1P14921 441 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 ZFXP17010 805 aaPredicted RBP11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 RPL9P32969 192 aaKnown RBP11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 LHX1P48742 406 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 FLT3LGP49771 235 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 ATP11AP98196 1134 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 CBLBQ13191 982 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 CDO1Q16878 200 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 SLC9A4Q6AI14 798 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 PRUNE1Q86TP1 453 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 NLRP14Q86W24 1093 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 OSTM1Q86WC4 334 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 PSTKQ8IV42 348 aaKnown RBP11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 SNRNP25Q9BV90 132 aaKnown RBP11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 SAYSD1Q9NPB0 183 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 ACTL7BQ9Y614 415 aa11.27□□□□□ -0.61
PHACTR4-204ENST00000493669 SMIM23A6NLE4 172 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 APOL1O14791 398 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 PGK1P00558 417 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 CHRNA1P02708 482 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 THP07101 528 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 TSHRP16473 764 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 CTCFP49711 727 aaPredicted RBP11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 HDAC4P56524 1084 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 IFI35P80217 286 aaPredicted RBP11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 RASA2Q15283 850 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 DPYSL2Q16555 572 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 LONRF1Q17RB8 773 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 ERMARDQ5T6L9 678 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 C4orf22Q6V702 233 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 TDRPQ86YL5 185 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 NAT8LQ8N9F0 302 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 MYCBPAPQ8TBZ2 947 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 RTP4Q96DX8 246 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 GGA2Q9UJY4 613 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 GABRQQ9UN88 632 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 ATXN2Q99700 1313 aaKnown RBP11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 ZNF623O75123 536 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 NPR3P17342 541 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 PTPN1P18031 435 aaKnown RBP11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 RPL22P35268 128 aaKnown RBP11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 SLCO1A2P46721 670 aa11.26□□□□□ -0.61
PHACTR4-204ENST00000493669 CCT5P48643 541 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms