RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 LSM14BQ9BX40 385 aaKnown RBP16.03■□□□□ 0.16
SS18L1-204ENST00000491916 NMUR1Q9HB89 426 aa16.03■□□□□ 0.16
SS18L1-204ENST00000491916 TDP1Q9NUW8 608 aa16.03■□□□□ 0.16
SS18L1-204ENST00000491916 EHD2Q9NZN4 543 aa16.03■□□□□ 0.16
SS18L1-204ENST00000491916 WNT16Q9UBV4 365 aa16.03■□□□□ 0.16
SS18L1-204ENST00000491916 HELZP42694 1942 aaKnown RBP16.02■□□□□ 0.16
SS18L1-204ENST00000491916 XPO1O14980 1071 aaKnown RBP16.02■□□□□ 0.16
SS18L1-204ENST00000491916 CYP26A1O43174 497 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 KRT5P13647 590 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 UCHL3P15374 230 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 PFKLP17858 780 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 PSMC3P17980 439 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 PLA2G4AP47712 749 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 BCAT1P54687 386 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 BST2Q10589 180 aaKnown RBP16.02■□□□□ 0.16
SS18L1-204ENST00000491916 FAM71AQ8IYT1 594 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 DEPDC1BQ8WUY9 529 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 ZNF606Q8WXB4 792 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 E2F7Q96AV8 911 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 ZFRQ96KR1 1074 aaKnown RBP16.02■□□□□ 0.16
SS18L1-204ENST00000491916 SLITRK1Q96PX8 696 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 C1QTNF1Q9BXJ1 281 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 DNAI2Q9GZS0 605 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 FBXO44Q9H4M3 255 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 TRPC7Q9HCX4 862 aa16.02■□□□□ 0.16
SS18L1-204ENST00000491916 ZNF318Q5VUA4 2279 aa16.02■□□□□ 0.15
SS18L1-204ENST00000491916 MYO16Q9Y6X6 1858 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 SMTNL1A8MU46 457 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 PRR33A8MZF0 331 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 PES1O00541 588 aaKnown RBP16.01■□□□□ 0.15
SS18L1-204ENST00000491916 TEX33O43247 280 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 COCHO43405 550 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 TCF3P15923 654 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 HDCP19113 662 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 GPD2P43304 727 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 RPL34P49207 117 aaKnown RBP16.01■□□□□ 0.15
SS18L1-204ENST00000491916 SLC7A9P82251 487 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 DRAP1Q14919 205 aaPredicted RBP16.01■□□□□ 0.15
SS18L1-204ENST00000491916 ZNF77Q15935 545 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 PM20D1Q6GTS8 502 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 PMF1Q6P1K2 205 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 CCDC186Q7Z3E2 898 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 LUZP1Q86V48 1076 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 CELF5Q8N6W0 485 aaKnown RBP16.01■□□□□ 0.15
SS18L1-204ENST00000491916 PDZD8Q8NEN9 1154 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 KCTD13Q8WZ19 329 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 ERGIC2Q96RQ1 377 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 TRMT61BQ9BVS5 477 aaKnown RBP16.01■□□□□ 0.15
SS18L1-204ENST00000491916 CCSER2Q9H7U1 834 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 TRPV5Q9NQA5 729 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 CYTH4Q9UIA0 394 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 ARHGAP26Q9UNA1 814 aa16.01■□□□□ 0.15
SS18L1-204ENST00000491916 TRAV19A0A0A6YYK7 116 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 A0A1W2PQH9 124 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 USP17L7P0C7H9 530 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 SETSIPP0DME0 302 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 CDK11BP21127 795 aaKnown RBP16■□□□□ 0.15
SS18L1-204ENST00000491916 GDI1P31150 447 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 AVPR1AP37288 418 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 TUBP50607 506 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 USP4Q13107 963 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 SYCP1Q15431 976 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 STILQ15468 1287 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 TMEM31Q5JXX7 168 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 DENND1BQ6P3S1 775 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 WDTC1Q8N5D0 677 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 BPIFB1Q8TDL5 484 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 NDRG1Q92597 394 aaKnown RBP16■□□□□ 0.15
SS18L1-204ENST00000491916 SECISBP2LQ93073 1101 aaKnown RBP16■□□□□ 0.15
SS18L1-204ENST00000491916 ZFYVE19Q96K21 471 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 NAP1L5Q96NT1 182 aaPredicted RBP16■□□□□ 0.15
SS18L1-204ENST00000491916 FAM83CQ9BQN1 747 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 RTN4Q9NQC3 1192 aaKnown RBP16■□□□□ 0.15
SS18L1-204ENST00000491916 TICRRQ7Z2Z1 1910 aa16■□□□□ 0.15
SS18L1-204ENST00000491916 M0QYV0 167 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 CHADO15335 359 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 TBX18O95935 607 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 GNA15P30679 374 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 TKTL1P51854 596 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 JAM2P57087 298 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 MEA1Q16626 185 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 SLC44A4Q53GD3 710 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 CWF19L1Q69YN2 538 aaKnown RBP15.99■□□□□ 0.15
SS18L1-204ENST00000491916 SLC47A2Q86VL8 602 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 SIX5Q8N196 739 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 ZNF276Q8N554 614 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 DDX1Q92499 740 aaKnown RBP15.99■□□□□ 0.15
SS18L1-204ENST00000491916 WBP2Q969T9 261 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 DDX23Q9BUQ8 820 aaKnown RBP15.99■□□□□ 0.15
SS18L1-204ENST00000491916 STK33Q9BYT3 514 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 ULBP1Q9BZM6 244 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 KIF9Q9HAQ2 790 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 CYLDQ9NQC7 956 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.99■□□□□ 0.15
SS18L1-204ENST00000491916 HESX1Q9UBX0 185 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 CA14Q9ULX7 337 aa15.99■□□□□ 0.15
SS18L1-204ENST00000491916 A0A1B0GTH6 734 aa15.98■□□□□ 0.15
SS18L1-204ENST00000491916 OTOL1A6NHN0 477 aaPredicted RBP15.98■□□□□ 0.15
SS18L1-204ENST00000491916 F8VZ95 297 aa15.98■□□□□ 0.15
SS18L1-204ENST00000491916 LEFTY2O00292 366 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms