RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 APBA1Q02410 837 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 MAN2A1Q16706 1144 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 SGSM1Q2NKQ1 1148 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 DCAF17Q5H9S7 520 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-219ENST00000491747 ZNF667Q5HYK9 610 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 FAM171BQ6P995 826 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 FOXR2Q6PJQ5 311 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 GET4Q7L5D6 327 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-219ENST00000491747 RNF10Q8N5U6 811 aaKnown RBP9.94□□□□□ -0.82
BRCA1-219ENST00000491747 SPATA18Q8TC71 538 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 SLC35C1Q96A29 364 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 CEP63Q96MT8 703 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 FAM207AQ9NSI2 230 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-219ENST00000491747 MUTYHQ9UIF7 546 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 USTQ9Y2C2 406 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 SIK3Q9Y2K2 1263 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 NR2E1Q9Y466 385 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 FAM169AQ9Y6X4 670 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 TRIOO75962 3097 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 PJA2O43164 708 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 CLSTN1O94985 981 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 RHOP08100 348 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 HAPLN1P10915 354 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-219ENST00000491747 PTPN2P17706 415 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 FSHRP23945 695 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 GNL1P36915 607 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-219ENST00000491747 MAGEA1P43355 309 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 ASPAP45381 313 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 GPR15P49685 360 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 SKOR1P84550 965 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 CFAP221Q4G0U5 840 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 TCERG1LQ5VWI1 586 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 KRT39Q6A163 491 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 SUGP1Q8IWZ8 645 aaKnown RBP9.94□□□□□ -0.82
BRCA1-219ENST00000491747 IFT20Q8IY31 132 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 DCP1BQ8IZD4 617 aaKnown RBP9.94□□□□□ -0.82
BRCA1-219ENST00000491747 STKLD1Q8NE28 680 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 OR6B3Q8NGW1 331 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 TCEAL4Q96EI5 215 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 NOX5Q96PH1 765 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 SYT15Q9BQS2 421 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 CORO1BQ9BR76 489 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 LRRC3Q9BY71 257 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 EDEM3Q9BZQ6 932 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 LUC7LQ9NQ29 371 aaKnown RBP9.94□□□□□ -0.82
BRCA1-219ENST00000491747 ABI2Q9NYB9 513 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-219ENST00000491747 LIMD1Q9UGP4 676 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 ARMCX3Q9UH62 379 aaPredicted RBP9.94□□□□□ -0.82
BRCA1-219ENST00000491747 SSU72P8A0A1W2PR75 194 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 MOSPD3O75425 235 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 ASGR2P07307 311 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 CYP2F1P24903 491 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 GBP2P32456 591 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-219ENST00000491747 GTF2H1P32780 548 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 TSPY1Q01534 308 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 SLC7A5Q01650 507 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 MGAT5BQ3V5L5 792 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 PABPC1LQ4VXU2 614 aaKnown RBP9.93□□□□□ -0.82
BRCA1-219ENST00000491747 PRSS36Q5K4E3 855 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 MMS22LQ6ZRQ5 1243 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 B4GALNT4Q76KP1 1039 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 FRMD5Q7Z6J6 570 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 SPATS2Q86XZ4 545 aaKnown RBP9.93□□□□□ -0.82
BRCA1-219ENST00000491747 ZDHHC14Q8IZN3 488 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 TDRD5Q8NAT2 981 aaKnown RBP9.93□□□□□ -0.82
BRCA1-219ENST00000491747 GPR152Q8TDT2 470 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 ING5Q8WYH8 240 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 SEPT5Q99719 369 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-219ENST00000491747 HINFPQ9BQA5 517 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 SMOC2Q9H3U7 446 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 YY1AP1Q9H869 796 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 HSFX1Q9UBD0 423 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 HMGXB4Q9UGU5 601 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 CDH9Q9ULB4 789 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 PCDHB5Q9Y5E4 795 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 NCOR1O75376 2440 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 LRRC53A6NM62 1247 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 PI4K2BG5E9Z4 385 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 FAM163BP0C2L3 166 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 GJA1P17302 382 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 PCSK1P29120 753 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 CXCR5P32302 372 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 USP8P40818 1118 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 MXI1P50539 228 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 CCDC40Q4G0X9 1142 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 SDHAF4Q5VUM1 108 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 RRAGAQ7L523 313 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 OTOP3Q7RTS5 596 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 CACNA2D4Q7Z3S7 1137 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 TMC8Q8IU68 726 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 SPPL2BQ8TCT7 592 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 GIPC2Q8TF65 315 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 C2orf15Q8WU43 125 aaKnown RBP9.93□□□□□ -0.82
BRCA1-219ENST00000491747 RSAD2Q8WXG1 361 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 TAF4BQ92750 862 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 TATDN2Q93075 761 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 ZNF512Q96ME7 567 aaPredicted RBP9.93□□□□□ -0.82
BRCA1-219ENST00000491747 PSMB7Q99436 277 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 BCO2Q9BYV7 579 aa9.93□□□□□ -0.82
BRCA1-219ENST00000491747 NUCKS1Q9H1E3 243 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms