RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 GKAP1Q5VSY0 366 aaPredicted RBP23.9■■□□□ 1.42
USF3-203ENST00000491165 KCNT2Q6UVM3 1135 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 SLC47A2Q86VL8 602 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 OSTM1Q86WC4 334 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 CCDC13Q8IYE1 715 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 CD101Q93033 1021 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 XPO6Q96QU8 1125 aaKnown RBP23.9■■□□□ 1.42
USF3-203ENST00000491165 RAD9AQ99638 391 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 CHORDC1Q9UHD1 332 aaPredicted RBP23.9■■□□□ 1.42
USF3-203ENST00000491165 MTUS1Q9ULD2 1270 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 CNTN6Q9UQ52 1028 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 PCDHB4Q9Y5E5 795 aa23.9■■□□□ 1.42
USF3-203ENST00000491165 M0QZQ0 153 aa23.89■■□□□ 1.42
USF3-203ENST00000491165 ATMINO43313 823 aaPredicted RBP23.89■■□□□ 1.42
USF3-203ENST00000491165 CILPO75339 1184 aa23.89■■□□□ 1.42
USF3-203ENST00000491165 ALDH7A1P49419 539 aaKnown RBP23.89■■□□□ 1.42
USF3-203ENST00000491165 INCA1Q0VD86 236 aa23.89■■□□□ 1.42
USF3-203ENST00000491165 ERMARDQ5T6L9 678 aa23.89■■□□□ 1.42
USF3-203ENST00000491165 DSTYKQ6XUX3 929 aa23.89■■□□□ 1.42
USF3-203ENST00000491165 CPLX4Q7Z7G2 160 aa23.89■■□□□ 1.42
USF3-203ENST00000491165 CROCCP2Q86T23 111 aa23.89■■□□□ 1.42
USF3-203ENST00000491165 ZDHHC14Q8IZN3 488 aa23.89■■□□□ 1.42
USF3-203ENST00000491165 APPL2Q8NEU8 664 aa23.89■■□□□ 1.42
USF3-203ENST00000491165 ZNF564Q8TBZ8 553 aaPredicted RBP23.89■■□□□ 1.42
USF3-203ENST00000491165 MDM1Q8TC05 714 aa23.89■■□□□ 1.42
USF3-203ENST00000491165 FAXDC2Q96IV6 333 aa23.89■■□□□ 1.42
USF3-203ENST00000491165 VN1R3Q9BXE9 311 aa23.89■■□□□ 1.42
USF3-203ENST00000491165 FAM129AQ9BZQ8 928 aa23.89■■□□□ 1.42
USF3-203ENST00000491165 PYGMP11217 842 aa23.89■■□□□ 1.41
USF3-203ENST00000491165 P4HA1P13674 534 aa23.89■■□□□ 1.41
USF3-203ENST00000491165 ZNF132P52740 706 aa23.89■■□□□ 1.41
USF3-203ENST00000491165 SLC29A2Q14542 456 aa23.89■■□□□ 1.41
USF3-203ENST00000491165 CYP1B1Q16678 543 aa23.89■■□□□ 1.41
USF3-203ENST00000491165 CCDC142Q17RM4 750 aa23.89■■□□□ 1.41
USF3-203ENST00000491165 SPOUT1Q5T280 376 aaKnown RBP23.89■■□□□ 1.41
USF3-203ENST00000491165 SP7Q8TDD2 431 aaPredicted RBP23.89■■□□□ 1.41
USF3-203ENST00000491165 SUSD3Q96L08 255 aa23.89■■□□□ 1.41
USF3-203ENST00000491165 NUP85Q9BW27 656 aa23.89■■□□□ 1.41
USF3-203ENST00000491165 MTIF3Q9H2K0 278 aaKnown RBP23.89■■□□□ 1.41
USF3-203ENST00000491165 PCDHA3Q9Y5H8 950 aa23.89■■□□□ 1.41
USF3-203ENST00000491165 PLXNA4Q9HCM2 1894 aa23.88■■□□□ 1.41
USF3-203ENST00000491165 GOLGA6L7A0A1B0GV03 622 aa23.88■■□□□ 1.41
USF3-203ENST00000491165 SPOPO43791 374 aa23.88■■□□□ 1.41
USF3-203ENST00000491165 HUS1O60921 280 aa23.88■■□□□ 1.41
USF3-203ENST00000491165 TADA2AO75478 443 aa23.88■■□□□ 1.41
USF3-203ENST00000491165 CYP1A2P05177 515 aa23.88■■□□□ 1.41
USF3-203ENST00000491165 NDST1P52848 882 aa23.88■■□□□ 1.41
USF3-203ENST00000491165 TAS1R1Q7RTX1 841 aa23.88■■□□□ 1.41
USF3-203ENST00000491165 SLC13A5Q86YT5 568 aaPredicted RBP23.88■■□□□ 1.41
USF3-203ENST00000491165 ADGRF2Q8IZF7 708 aa23.88■■□□□ 1.41
USF3-203ENST00000491165 TOP6BLQ8N6T0 577 aa23.88■■□□□ 1.41
USF3-203ENST00000491165 RBBP8NLQ8NC74 664 aaPredicted RBP23.88■■□□□ 1.41
USF3-203ENST00000491165 CHMP6Q96FZ7 201 aa23.88■■□□□ 1.41
USF3-203ENST00000491165 LPIN3Q9BQK8 851 aa23.88■■□□□ 1.41
USF3-203ENST00000491165 ELOVL4Q9GZR5 314 aa23.88■■□□□ 1.41
USF3-203ENST00000491165 DPEP3Q9H4B8 488 aa23.88■■□□□ 1.41
USF3-203ENST00000491165 CYP3A43Q9HB55 503 aa23.88■■□□□ 1.41
USF3-203ENST00000491165 RGS16O15492 202 aaPredicted RBP23.87■■□□□ 1.41
USF3-203ENST00000491165 MMEP08473 750 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 DRD4P21917 467 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 TKTP29401 623 aaKnown RBP23.87■■□□□ 1.41
USF3-203ENST00000491165 ADCY2Q08462 1091 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 SLMAPQ14BN4 828 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 CCDC105Q8IYK2 499 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 FAM81BQ96LP2 452 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 TLDC2A0PJX2 215 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 EFEMP2O95967 443 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 COILP38432 576 aaPredicted RBP23.87■■□□□ 1.41
USF3-203ENST00000491165 MMP13P45452 471 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 RAD23BP54727 409 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 FMO1Q01740 532 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 C6orf118Q5T5N4 469 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 COLGALT1Q8NBJ5 622 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 ZNF653Q96CK0 615 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 IGSF21Q96ID5 467 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 SEMA4AQ9H3S1 761 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 GTF3C4Q9UKN8 822 aa23.87■■□□□ 1.41
USF3-203ENST00000491165 BARX2Q9UMQ3 279 aaPredicted RBP23.87■■□□□ 1.41
USF3-203ENST00000491165 GABRDO14764 452 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 CHN1P15882 459 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 KIAA0319Q5VV43 1072 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 FUT10Q6P4F1 479 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 FIBCD1Q8N539 461 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 SLC4A11Q8NBS3 891 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 OR6B3Q8NGW1 331 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 CLP1Q92989 425 aaKnown RBP23.86■■□□□ 1.41
USF3-203ENST00000491165 SELENOSQ9BQE4 189 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 RTP3Q9BQQ7 232 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 UVRAGQ9P2Y5 699 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 AGTP01019 485 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 PDGFRBP09619 1106 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 PBX2P40425 430 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 MNAT1P51948 309 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 DPH6Q7L8W6 267 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 SLC39A11Q8N1S5 342 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 TMEM109Q9BVC6 243 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 COLEC11Q9BWP8 271 aa23.86■■□□□ 1.41
USF3-203ENST00000491165 TCRBV7S2A1N4TA0A589 114 aa23.85■■□□□ 1.41
USF3-203ENST00000491165 CFHP08603 1231 aa23.85■■□□□ 1.41
USF3-203ENST00000491165 CYP11B1P15538 503 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms