RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 NBEAQ8NFP9 2946 aa22■■□□□ 1.11
CLIP2-208ENST00000491075 TCRBV21S2A2A0A5A6 115 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 E2F8A0AVK6 867 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 AP5Z1O43299 807 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 HYAL3O43820 417 aaPredicted RBP21.99■■□□□ 1.11
CLIP2-208ENST00000491075 CFIP05156 583 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 MBL2P11226 248 aaPredicted RBP21.99■■□□□ 1.11
CLIP2-208ENST00000491075 SEMA3BQ13214 749 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 EMC10Q5UCC4 262 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 CCDC73Q6ZRK6 1079 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 STXBP4Q6ZWJ1 553 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 HS2ST1Q7LGA3 356 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 TRMT11Q7Z4G4 463 aaKnown RBP21.99■■□□□ 1.11
CLIP2-208ENST00000491075 PIP4P1Q86T03 277 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 PGBD3Q8N328 593 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 CEP76Q8TAP6 659 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 OTUB2Q96DC9 234 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 SNX25Q9H3E2 840 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 MSRB2Q9Y3D2 182 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 CLIC4Q9Y696 253 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 PCDH15Q96QU1 1955 aa21.99■■□□□ 1.11
CLIP2-208ENST00000491075 ATXN2Q99700 1313 aaKnown RBP21.99■■□□□ 1.11
CLIP2-208ENST00000491075 CACNA1EQ15878 2313 aa21.98■■□□□ 1.11
CLIP2-208ENST00000491075 FREM2Q5SZK8 3169 aa21.98■■□□□ 1.11
CLIP2-208ENST00000491075 PRPF6O94906 941 aaKnown RBP21.98■■□□□ 1.11
CLIP2-208ENST00000491075 ITPKAP23677 461 aa21.98■■□□□ 1.11
CLIP2-208ENST00000491075 GNL1P36915 607 aaPredicted RBP21.98■■□□□ 1.11
CLIP2-208ENST00000491075 ATXN3P54252 364 aaPredicted RBP21.98■■□□□ 1.11
CLIP2-208ENST00000491075 SIM1P81133 766 aaPredicted RBP21.98■■□□□ 1.11
CLIP2-208ENST00000491075 DUOXA1Q1HG43 343 aa21.98■■□□□ 1.11
CLIP2-208ENST00000491075 PREPLQ4J6C6 727 aaPredicted RBP21.98■■□□□ 1.11
CLIP2-208ENST00000491075 RABEPKQ7Z6M1 372 aa21.98■■□□□ 1.11
CLIP2-208ENST00000491075 CBWD2Q8IUF1 395 aa21.98■■□□□ 1.11
CLIP2-208ENST00000491075 PHTF2Q8N3S3 785 aa21.98■■□□□ 1.11
CLIP2-208ENST00000491075 HDDC3Q8N4P3 179 aa21.98■■□□□ 1.11
CLIP2-208ENST00000491075 PDZD8Q8NEN9 1154 aa21.98■■□□□ 1.11
CLIP2-208ENST00000491075 KCNV2Q8TDN2 545 aa21.98■■□□□ 1.11
CLIP2-208ENST00000491075 KIAA1586Q9HCI6 787 aa21.98■■□□□ 1.11
CLIP2-208ENST00000491075 SLC6A14Q9UN76 642 aa21.98■■□□□ 1.11
CLIP2-208ENST00000491075 TACC1O75410 805 aa21.97■■□□□ 1.11
CLIP2-208ENST00000491075 STAT6P42226 847 aa21.97■■□□□ 1.11
CLIP2-208ENST00000491075 GAD2Q05329 585 aa21.97■■□□□ 1.11
CLIP2-208ENST00000491075 LY6G5CQ5SRR4 150 aa21.97■■□□□ 1.11
CLIP2-208ENST00000491075 BTBD8Q5XKL5 378 aa21.97■■□□□ 1.11
CLIP2-208ENST00000491075 SLC36A4Q6YBV0 504 aa21.97■■□□□ 1.11
CLIP2-208ENST00000491075 OVCA2Q8WZ82 227 aa21.97■■□□□ 1.11
CLIP2-208ENST00000491075 MRPL45Q9BRJ2 306 aaKnown RBP21.97■■□□□ 1.11
CLIP2-208ENST00000491075 ZDHHC4Q9NPG8 344 aa21.97■■□□□ 1.11
CLIP2-208ENST00000491075 KLK13Q9UKR3 277 aa21.97■■□□□ 1.11
CLIP2-208ENST00000491075 SPAARA0A1B0GVQ0 90 aa21.96■■□□□ 1.11
CLIP2-208ENST00000491075 VPS37CA5D8V6 355 aaPredicted RBP21.96■■□□□ 1.11
CLIP2-208ENST00000491075 H0Y626 953 aa21.96■■□□□ 1.11
CLIP2-208ENST00000491075 RTN3O95197 1032 aaPredicted RBP21.96■■□□□ 1.11
CLIP2-208ENST00000491075 TRIM16O95361 564 aa21.96■■□□□ 1.11
CLIP2-208ENST00000491075 FAM163BP0C2L3 166 aa21.96■■□□□ 1.11
CLIP2-208ENST00000491075 HOXB3P14651 431 aaPredicted RBP21.96■■□□□ 1.11
CLIP2-208ENST00000491075 PTPN1P18031 435 aaKnown RBP21.96■■□□□ 1.11
CLIP2-208ENST00000491075 RDXP35241 583 aaKnown RBP21.96■■□□□ 1.11
CLIP2-208ENST00000491075 CACNA2D1P54289 1103 aa21.96■■□□□ 1.11
CLIP2-208ENST00000491075 RPL6Q02878 288 aaKnown RBP21.96■■□□□ 1.11
CLIP2-208ENST00000491075 GFPT1Q06210 699 aaPredicted RBP21.96■■□□□ 1.11
CLIP2-208ENST00000491075 IFRD2Q12894 506 aaPredicted RBP21.96■■□□□ 1.11
CLIP2-208ENST00000491075 NUDT18Q6ZVK8 323 aa21.96■■□□□ 1.11
CLIP2-208ENST00000491075 TRAPPC11Q7Z392 1133 aa21.96■■□□□ 1.11
CLIP2-208ENST00000491075 ETFBKMTQ8IXQ9 262 aa21.96■■□□□ 1.11
CLIP2-208ENST00000491075 CCDC65Q8IXS2 484 aa21.96■■□□□ 1.11
CLIP2-208ENST00000491075 ZNF513Q8N8E2 541 aaPredicted RBP21.96■■□□□ 1.11
CLIP2-208ENST00000491075 OR6B3Q8NGW1 331 aa21.96■■□□□ 1.11
CLIP2-208ENST00000491075 CLIC6Q96NY7 704 aa21.96■■□□□ 1.11
CLIP2-208ENST00000491075 ZNF518BQ9C0D4 1074 aa21.96■■□□□ 1.11
CLIP2-208ENST00000491075 TMEM30AQ9NV96 361 aa21.96■■□□□ 1.11
CLIP2-208ENST00000491075 HSPBP1Q9NZL4 362 aa21.96■■□□□ 1.11
CLIP2-208ENST00000491075 NME7Q9Y5B8 376 aa21.96■■□□□ 1.11
CLIP2-208ENST00000491075 TBC1D3BA6NDS4 549 aa21.95■■□□□ 1.1
CLIP2-208ENST00000491075 HOXC11O43248 304 aaPredicted RBP21.95■■□□□ 1.1
CLIP2-208ENST00000491075 SERPINF2P08697 491 aa21.95■■□□□ 1.1
CLIP2-208ENST00000491075 YWHAQP27348 245 aa21.95■■□□□ 1.1
CLIP2-208ENST00000491075 TNNC1P63316 161 aa21.95■■□□□ 1.1
CLIP2-208ENST00000491075 NUP93Q8N1F7 819 aa21.95■■□□□ 1.1
CLIP2-208ENST00000491075 FBXO32Q969P5 355 aa21.95■■□□□ 1.1
CLIP2-208ENST00000491075 ZFRQ96KR1 1074 aaKnown RBP21.95■■□□□ 1.1
CLIP2-208ENST00000491075 DUSP9Q99956 384 aaKnown RBP21.95■■□□□ 1.1
CLIP2-208ENST00000491075 GTPBP2Q9BX10 602 aaKnown RBP21.95■■□□□ 1.1
CLIP2-208ENST00000491075 CAPN10Q9HC96 672 aa21.95■■□□□ 1.1
CLIP2-208ENST00000491075 DEC1Q9P2X7 70 aa21.95■■□□□ 1.1
CLIP2-208ENST00000491075 COCHO43405 550 aa21.94■■□□□ 1.1
CLIP2-208ENST00000491075 OPHN1O60890 802 aa21.94■■□□□ 1.1
CLIP2-208ENST00000491075 GABRG2P18507 467 aa21.94■■□□□ 1.1
CLIP2-208ENST00000491075 TERB1Q8NA31 727 aa21.94■■□□□ 1.1
CLIP2-208ENST00000491075 B3GALNT2Q8NCR0 500 aa21.94■■□□□ 1.1
CLIP2-208ENST00000491075 DPEP3Q9H4B8 488 aa21.94■■□□□ 1.1
CLIP2-208ENST00000491075 CALCOCO1Q9P1Z2 691 aa21.94■■□□□ 1.1
CLIP2-208ENST00000491075 SH3BP1Q9Y3L3 701 aa21.94■■□□□ 1.1
CLIP2-208ENST00000491075 ITPR1Q14643 2758 aa21.93■■□□□ 1.1
CLIP2-208ENST00000491075 ATP8B3O60423 1300 aa21.93■■□□□ 1.1
CLIP2-208ENST00000491075 TULP3O75386 442 aa21.93■■□□□ 1.1
CLIP2-208ENST00000491075 DLATP10515 647 aaKnown RBP21.93■■□□□ 1.1
CLIP2-208ENST00000491075 HOXB2P14652 356 aa21.93■■□□□ 1.1
CLIP2-208ENST00000491075 TNNI1P19237 187 aa21.93■■□□□ 1.1
CLIP2-208ENST00000491075 TUBP50607 506 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms