RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 FARP1Q9Y4F1 1045 aaPredicted RBP16.81■□□□□ 0.28
SNX5-214ENST00000490175 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.81■□□□□ 0.28
SNX5-214ENST00000490175 MDM4O15151 490 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 CDH16O75309 829 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 GRAP2O75791 330 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 FGFR1P11362 822 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 CHN1P15882 459 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 WARSP23381 471 aaKnown RBP16.8■□□□□ 0.28
SNX5-214ENST00000490175 STIP1P31948 543 aaKnown RBP16.8■□□□□ 0.28
SNX5-214ENST00000490175 SOX4Q06945 474 aaPredicted RBP16.8■□□□□ 0.28
SNX5-214ENST00000490175 CRHR2Q13324 411 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 NOMO1Q15155 1222 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 CENPUQ71F23 418 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 ADGRF2Q8IZF7 708 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 FAM172AQ8WUF8 416 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 PRCCQ92733 491 aaPredicted RBP16.8■□□□□ 0.28
SNX5-214ENST00000490175 C9orf72Q96LT7 481 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 SELENOSQ9BQE4 189 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 GTF2IRD1Q9UHL9 959 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 GGA2Q9UJY4 613 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 TRPV2Q9Y5S1 764 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 SCN10AQ9Y5Y9 1956 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 ALOX15BO15296 676 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 GABBR2O75899 941 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 LILRA4P59901 499 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 KRT81Q14533 505 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 CDO1Q16878 200 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 EXOC3L1Q86VI1 746 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 HACE1Q8IYU2 909 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 ARRDC4Q8NCT1 418 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 TRPV1Q8NER1 839 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 SPATA18Q8TC71 538 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 RNF157Q96PX1 679 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 UPF3AQ9H1J1 476 aaKnown RBP16.8■□□□□ 0.28
SNX5-214ENST00000490175 PPCSQ9HAB8 311 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 NGRNQ9NPE2 291 aaKnown RBP16.8■□□□□ 0.28
SNX5-214ENST00000490175 SLC38A7Q9NVC3 462 aa16.8■□□□□ 0.28
SNX5-214ENST00000490175 KIAA0754O94854 1291 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 PDGFRBP09619 1106 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 RBP3P10745 1247 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 CYBAP13498 195 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 CCDC130P13994 396 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 LMO2P25791 158 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 CTCFP49711 727 aaPredicted RBP16.79■□□□□ 0.28
SNX5-214ENST00000490175 NKX3-2P78367 333 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 ATP11AP98196 1134 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 GNASQ5JWF2 1037 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 MFSD14CQ5VZR4 134 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 MDM1Q8TC05 714 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.79■□□□□ 0.28
SNX5-214ENST00000490175 P3H4Q92791 437 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 ARHGEF2Q92974 986 aaKnown RBP16.79■□□□□ 0.28
SNX5-214ENST00000490175 PPP1R10Q96QC0 940 aaKnown RBP16.79■□□□□ 0.28
SNX5-214ENST00000490175 CCDC134Q9H6E4 229 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 SPC25Q9HBM1 224 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 CHST12Q9NRB3 414 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 RNF19AQ9NV58 838 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 MYADML2A6NDP7 307 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 PTGESO14684 152 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 TGM2P21980 687 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 ADORA2BP29275 332 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 RPL22P35268 128 aaKnown RBP16.79■□□□□ 0.28
SNX5-214ENST00000490175 GDF10P55107 478 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 ROR1Q01973 937 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 CENPIQ92674 756 aaPredicted RBP16.79■□□□□ 0.28
SNX5-214ENST00000490175 ZNF670Q9BS34 389 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 C11orf84Q9BUA3 381 aaPredicted RBP16.79■□□□□ 0.28
SNX5-214ENST00000490175 GOLGA2P5Q9HBQ8 144 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 INTS9Q9NV88 658 aaKnown RBP16.79■□□□□ 0.28
SNX5-214ENST00000490175 CDY2AQ9Y6F7 541 aa16.79■□□□□ 0.28
SNX5-214ENST00000490175 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.78■□□□□ 0.28
SNX5-214ENST00000490175 FAM155AB1AL88 458 aaPredicted RBP16.78■□□□□ 0.28
SNX5-214ENST00000490175 XPO1O14980 1071 aaKnown RBP16.78■□□□□ 0.28
SNX5-214ENST00000490175 PSMC4P43686 418 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 FCGRTP55899 365 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 SLC8A3P57103 927 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 MMRN1Q13201 1228 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 HIF1AQ16665 826 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 ICE2Q659A1 982 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 SCYL2Q6P3W7 929 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 RPAINQ86UA6 219 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 UNC45BQ8IWX7 931 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 NAT8LQ8N9F0 302 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 B3GALNT2Q8NCR0 500 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 SLC2A14Q8TDB8 520 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 ATXN2LQ8WWM7 1075 aaKnown RBP16.78■□□□□ 0.28
SNX5-214ENST00000490175 CPT1BQ92523 772 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 HNRNPABQ99729 332 aaKnown RBP16.78■□□□□ 0.28
SNX5-214ENST00000490175 LPIN3Q9BQK8 851 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 B3GNT5Q9BYG0 378 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 PCDH18Q9HCL0 1135 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 ACTL7BQ9Y614 415 aa16.78■□□□□ 0.28
SNX5-214ENST00000490175 CFAP69A5D8W1 941 aa16.77■□□□□ 0.28
SNX5-214ENST00000490175 C5orf60A6NFR6 353 aa16.77■□□□□ 0.28
SNX5-214ENST00000490175 CA12O43570 354 aa16.77■□□□□ 0.28
SNX5-214ENST00000490175 HCRTO43612 131 aa16.77■□□□□ 0.28
SNX5-214ENST00000490175 IL4RP24394 825 aa16.77■□□□□ 0.28
SNX5-214ENST00000490175 CTGFP29279 349 aa16.77■□□□□ 0.28
SNX5-214ENST00000490175 TM4SF4P48230 202 aa16.77■□□□□ 0.28
SNX5-214ENST00000490175 LIG3P49916 1009 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms