RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 FUBP1Q96AE4 644 aaKnown RBP3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 APIPQ96GX9 242 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 TMEM41AQ96HV5 264 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 TTC14Q96N46 770 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 ZMAT2Q96NC0 199 aaKnown RBP3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 C7orf25Q9BPX7 421 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 MANSC1Q9H8J5 431 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 BRD9Q9H8M2 597 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 UNKLQ9H9P5 680 aaKnown RBP3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 OBP2BQ9NPH6 170 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 MAGED2Q9UNF1 606 aaPredicted RBP3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 RUSC2Q8N2Y8 1516 aa3.65□□□□□ -1.83
DEPDC1-204ENST00000489862 BIVM-ERCC5R4GMW8 1640 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 ABCA10Q8WWZ4 1543 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 TSPY2A6NKD2 308 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 AQP12BA6NM10 295 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 MGST3O14880 152 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 IGHDP01880 384 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 TSPY3P0CV98 308 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 TSPY8P0CW00 308 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 ALAS1P13196 640 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 HOXC13P31276 330 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 SLC6A4P31645 630 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 ZNF81P51508 661 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 CACNB3P54284 484 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 SIM1P81133 766 aaPredicted RBP3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 TSPY1Q01534 308 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 SLFN5Q08AF3 891 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 STARD3Q14849 445 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 ZNF169Q14929 603 aaPredicted RBP3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 MEA1Q16626 185 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 TIGD6Q17RP2 521 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 GEN1Q17RS7 908 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 SRRM1Q8IYB3 904 aaKnown RBP3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 SYTL1Q8IYJ3 562 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 CCDC33Q8N5R6 958 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 DCBLD1Q8N8Z6 715 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 PCYOX1LQ8NBM8 494 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 FAM98AQ8NCA5 519 aaKnown RBP3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 KLHDC4Q8TBB5 520 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 CAGE1Q8TC20 777 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 PTCD3Q96EY7 689 aaKnown RBP3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 AIFM2Q9BRQ8 373 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 C1QTNF7Q9BXJ2 289 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 STARD7Q9NQZ5 370 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 STK32BQ9NY57 414 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 LRFN1Q9P244 771 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 TLK1Q9UKI8 766 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 SCAF8Q9UPN6 1271 aaKnown RBP3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 PCDHA13Q9Y5I0 950 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 EIF4G3O43432 1585 aaKnown RBP3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 ITIH6Q6UXX5 1313 aa3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 COL3A1P02461 1466 aaPredicted RBP3.64□□□□□ -1.83
DEPDC1-204ENST00000489862 A0A1W2PPH5 198 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 FSD2A1L4K1 749 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 NPC1O15118 1278 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 FFAR2O15552 330 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 FRS3O43559 492 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 DOK2O60496 412 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 TNFRSF6BO95407 300 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 SBK3P0C264 359 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 FCER1AP12319 257 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 AKR1B1P15121 316 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 ALDH9A1P49189 494 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 VAV2P52735 878 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 DSC2Q02487 901 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 CREMQ03060 361 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 FOXF2Q12947 444 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 PRKG1Q13976 671 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 POLD3Q15054 466 aaPredicted RBP3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 ITPRIPL1Q6GPH6 555 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 DAAM2Q86T65 1068 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 LRRTM4Q86VH4 590 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 BOLLQ8N9W6 283 aaKnown RBP3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 Q8NA96 180 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 OR1N1Q8NGS0 311 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 NUP133Q8WUM0 1156 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 UCMAQ8WVF2 138 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 IPCEF1Q8WWN9 437 aaPredicted RBP3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 SLC9A6Q92581 669 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 TRIM63Q969Q1 353 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 SNX21Q969T3 373 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 PNKPQ96T60 521 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 RMDN3Q96TC7 470 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 C11orf54Q9H0W9 315 aaPredicted RBP3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 CWC25Q9NXE8 425 aaPredicted RBP3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 CPNE7Q9UBL6 633 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 AASSQ9UDR5 926 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 ZNF112Q9UJU3 913 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 GPR34Q9UPC5 381 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 PCDHB1Q9Y5F3 818 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 WDR97A6NE52 1622 aa3.63□□□□□ -1.83
DEPDC1-204ENST00000489862 A0A088AWK7 358 aa3.62□□□□□ -1.83
DEPDC1-204ENST00000489862 A0A1W2PPC4 97 aa3.62□□□□□ -1.83
DEPDC1-204ENST00000489862 BICDL2A1A5D9 508 aa3.62□□□□□ -1.83
DEPDC1-204ENST00000489862 ERVV-2B6SEH9 535 aa3.62□□□□□ -1.83
DEPDC1-204ENST00000489862 PLA2G6O60733 806 aa3.62□□□□□ -1.83
DEPDC1-204ENST00000489862 MTA2O94776 668 aa3.62□□□□□ -1.83
DEPDC1-204ENST00000489862 DNTTP04053 509 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms