RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 GFRA3O60609 400 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 MOSPD3O75425 235 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 FBXO21O94952 628 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 CYP11B1P15538 503 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 FERP16591 822 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 AVPR1AP37288 418 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 CCR2P41597 374 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 TCF15Q12870 199 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 TEAD2Q15562 447 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 SLC5A9Q2M3M2 681 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 PKDCCQ504Y2 493 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 RAB41Q5JT25 222 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 GPR158Q5T848 1215 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 PIGZQ86VD9 579 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 SLC47A2Q86VL8 602 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 TTC30AQ86WT1 665 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 SCML4Q8N228 414 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 ZNF276Q8N554 614 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 SCAMP5Q8TAC9 235 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 SMARCD2Q92925 531 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 TCEAL4Q96EI5 215 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 MYADMQ96S97 322 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 CDK5RAP1Q96SZ6 601 aaKnown RBP13.11□□□□□ -0.31
COL4A5-206ENST00000489230 MIS12Q9H081 205 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 TRPV4Q9HBA0 871 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 ZFP14Q9HCL3 533 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 TMEM30AQ9NV96 361 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 CHORDC1Q9UHD1 332 aaPredicted RBP13.11□□□□□ -0.31
COL4A5-206ENST00000489230 USP3Q9Y6I4 520 aa13.11□□□□□ -0.31
COL4A5-206ENST00000489230 TRAV19A0A0A6YYK7 116 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 ANHXE9PGG2 379 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 DPYSL4O14531 572 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 SART1O43290 800 aaKnown RBP13.1□□□□□ -0.31
COL4A5-206ENST00000489230 ECI2O75521 394 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 GFPT2O94808 682 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 ZBED1O96006 694 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 ABL1P00519 1130 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 TPM1P09493 284 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 USP17L7P0C7H9 530 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 CEBPBP17676 345 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 HDCP19113 662 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 GPD2P43304 727 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 TUBP50607 506 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 TKTL1P51854 596 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 USP46P62068 366 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 PLCB2Q00722 1185 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 HECTD3Q5T447 861 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 PM20D1Q6GTS8 502 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 SARM1Q6SZW1 724 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 TRIM72Q6ZMU5 477 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 CCDC186Q7Z3E2 898 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 TMEM150AQ86TG1 271 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 CMTM8Q8IZV2 173 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 SIX6OS1Q8N1H7 587 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 TMEM35BQ8NCS4 154 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 MSANTD4Q8NCY6 345 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 FEZF2Q8TBJ5 459 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 ING5Q8WYH8 240 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 IRGQQ8WZA9 623 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 SYN2Q92777 582 aaPredicted RBP13.1□□□□□ -0.31
COL4A5-206ENST00000489230 ATOH1Q92858 354 aaPredicted RBP13.1□□□□□ -0.31
COL4A5-206ENST00000489230 SECISBP2LQ93073 1101 aaKnown RBP13.1□□□□□ -0.31
COL4A5-206ENST00000489230 ZSWIM1Q9BR11 485 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 TRIM62Q9BVG3 475 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 XPO4Q9C0E2 1151 aaKnown RBP13.1□□□□□ -0.31
COL4A5-206ENST00000489230 CNGB3Q9NQW8 809 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 FAM86C1Q9NVL1 165 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 OBP2AQ9NY56 170 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 CLIC5Q9NZA1 410 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 AJAP1Q9UKB5 411 aaPredicted RBP13.1□□□□□ -0.31
COL4A5-206ENST00000489230 LUC7L2Q9Y383 392 aaKnown RBP13.1□□□□□ -0.31
COL4A5-206ENST00000489230 BZW2Q9Y6E2 419 aaKnown RBP13.1□□□□□ -0.31
COL4A5-206ENST00000489230 ITIH6Q6UXX5 1313 aa13.1□□□□□ -0.31
COL4A5-206ENST00000489230 TRIOO75962 3097 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 USP34Q70CQ2 3546 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 EPHB6O15197 1021 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 LSM8O95777 96 aaKnown RBP13.09□□□□□ -0.31
COL4A5-206ENST00000489230 ZDHHC11BP0C7U3 371 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 RALAP11233 206 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 GJA1P17302 382 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 PBX1P40424 430 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 RPL34P49207 117 aaKnown RBP13.09□□□□□ -0.31
COL4A5-206ENST00000489230 CDR2Q01850 454 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 IFRD2Q12894 506 aaPredicted RBP13.09□□□□□ -0.31
COL4A5-206ENST00000489230 TRIM14Q14142 442 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 ZNF268Q14587 947 aaPredicted RBP13.09□□□□□ -0.31
COL4A5-206ENST00000489230 TSR1Q2NL82 804 aaKnown RBP13.09□□□□□ -0.31
COL4A5-206ENST00000489230 FAM78AQ5JUQ0 283 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 SFMBT2Q5VUG0 894 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 SPECC1LQ69YQ0 1117 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 PPP1R2P3Q6NXS1 205 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 PMF1Q6P1K2 205 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 TMEM110Q86TL2 294 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 CELF5Q8N6W0 485 aaKnown RBP13.09□□□□□ -0.31
COL4A5-206ENST00000489230 KIAA1958Q8N8K9 716 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 MAB21L3Q8N8X9 362 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 ZSCAN18Q8TBC5 510 aaPredicted RBP13.09□□□□□ -0.31
COL4A5-206ENST00000489230 GOLGA1Q92805 767 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 ELSPBP1Q96BH3 223 aa13.09□□□□□ -0.31
COL4A5-206ENST00000489230 ASB16Q96NS5 453 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms